Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 3.7e-27 124.4 75 100.0
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 3.7e-27 124.4 75 100.0
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 4.8e-27 124.0 75 98.7
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 4.8e-27 124.0 75 98.7
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 8.2e-27 123.2 75 98.7
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 8.2e-27 123.2 75 98.7
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 8.2e-27 123.2 75 97.3
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 1.1e-26 122.9 75 97.3
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 1.4e-26 122.5 75 94.7
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 1.4e-26 122.5 75 97.3
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 1.4e-26 122.5 75 96.0
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 1.8e-26 122.1 75 96.0
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 1.8e-26 122.1 75 96.0
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 1.8e-26 122.1 75 96.0
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 1.8e-26 122.1 75 94.7
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 1.8e-26 122.1 75 94.7
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 2.4e-26 121.7 75 94.7
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 94.7
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 3.1e-26 121.3 75 96.0
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 4.1e-26 120.9 75 96.0
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 4.1e-26 120.9 75 96.0
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 97.3
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 96.0
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 5.3e-26 120.6 74 95.9
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 94.7
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 5.3e-26 120.6 75 93.3
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 93.3
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 93.3
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 94.7
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 93.3
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 7.0e-26 120.2 75 93.3
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 9.1e-26 119.8 75 92.0
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 1.2e-25 119.4 75 93.3
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 1.2e-25 119.4 75 92.0
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 1.2e-25 119.4 75 94.7
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 1.2e-25 119.4 75 93.3
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 90.7
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 90.7
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 1.5e-25 119.0 75 94.7
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 2.6e-25 118.2 75 90.7
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 2.6e-25 118.2 75 92.0
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 3.5e-25 117.9 75 92.0
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 3.5e-25 117.9 75 92.0
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 3.5e-25 117.9 75 92.0
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 3.5e-25 117.9 75 93.3
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 3.5e-25 117.9 75 93.3
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 5.9e-25 117.1 75 90.7
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 5.9e-25 117.1 75 92.0
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 7.7e-25 116.7 75 89.3
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 7.7e-25 116.7 75 92.0
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 1.7e-24 115.5 75 88.0
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 1.7e-24 115.5 75 94.7
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 1.7e-24 115.5 75 89.3
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 1.7e-24 115.5 75 89.3
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 2.2e-24 115.2 76 92.1
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 2.9e-24 114.8 75 92.0
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 5.0e-24 114.0 75 92.0
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 5.0e-24 114.0 75 90.7
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 6.5e-24 113.6 78 91.0
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 8.5e-24 113.2 71 93.0
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 1.1e-23 112.8 72 90.3
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 1.1e-23 112.8 75 86.7
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 1.4e-23 112.5 75 89.3
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 1.4e-23 112.5 75 89.3
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 1.2e-22 109.4 69 95.7
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 1.2e-22 109.4 73 89.0
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 2.1e-22 108.6 75 89.3
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 2.1e-22 108.6 71 91.5
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 2.7e-22 108.2 75 84.0
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 4.7e-22 107.5 73 86.3
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 4.7e-22 107.5 73 86.3
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 6.1e-22 107.1 75 82.7
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 1.4e-21 105.9 74 85.1
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 2.3e-21 105.1 73 83.6
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 2.3e-21 105.1 82 84.1
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 3.9e-21 104.4 72 86.1
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 3.9e-21 104.4 72 86.1
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 3.9e-21 104.4 72 86.1
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 3.9e-21 104.4 72 86.1
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 5.2e-21 104.0 69 87.0
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 5.2e-21 104.0 69 87.0
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 2.0e-20 102.1 72 84.7
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 5.7e-20 100.5 125 50.4
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 5.7e-20 100.5 72 81.9
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 9.7e-20 99.8 67 91.0
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 1.3e-19 99.4 49 95.9
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 2.2e-19 98.6 73 80.8
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 2.2e-19 98.6 73 80.8
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 2.2e-19 98.6 73 80.8
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 2.2e-19 98.6 75 69.3
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 1.1e-18 96.3 75 72.0
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 1.4e-18 95.9 75 70.7
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.4e-18 95.9 75 70.7
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 1.4e-18 95.9 72 79.2
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 1.4e-18 95.9 72 79.2
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 1.4e-18 95.9 70 85.7
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 2.4e-18 95.1 75 70.7
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 4.1e-18 94.4 70 78.6
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 1.2e-17 92.8 75 68.0
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 3.5e-17 91.3 72 69.4
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 5.9e-17 90.5 64 84.4
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 1.3e-16 89.4 49 85.7
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 5.0e-16 87.4 68 80.9
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 5.0e-16 87.4 68 80.9
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 6.5e-16 87.0 76 73.7
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 6.5e-16 87.0 68 66.2
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 1.5e-15 85.9 68 79.4
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 2.5e-15 85.1 68 79.4
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 4.2e-15 84.3 68 79.4
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 5.5e-15 84.0 68 76.5
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 7.2e-15 83.6 68 77.9
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 9.4e-15 83.2 68 77.9
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 2.1e-14 82.0 68 77.9
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 2.7e-14 81.6 68 76.5
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 6.1e-14 80.5 63 84.1
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 1.8e-13 79.0 41 95.1
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 5.2e-13 77.4 67 64.2
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 2.6e-12 75.1 69 49.3
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 7.5e-12 73.6 72 51.4
FAN11G1162 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.3e-11 72.8 117 44.4
TAR633G2362 Trochodendron aralioides HOM05D006191 ORTHO05D007660 2.7e-09 65.1 47 87.2
Dinv36184 Davidia involucrata HOM05D006191 ORTHO05D007660 1.0e-08 63.2 47 87.2
VMungo1080G0693 Vigna mungo HOM05D006191 ORTHO05D007660 5.0e-08 60.8 113 46.0
SalBow1G5107 Salvia bowleyana HOM05D006191 ORTHO05D007660 2.7e-06 55.1 45 64.4


User provided reference genes

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