Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 2.4e-57 225.3 118 100.0
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 7.8e-56 220.3 118 98.3
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 8.9e-52 206.8 118 94.9
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 1.5e-46 189.5 118 87.3
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 7.8e-32 140.6 96 83.3
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 3.3e-30 135.2 96 81.2
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 4.6e-24 114.8 119 54.6
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 7.8e-24 114.0 117 53.8
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 3.9e-23 111.7 117 51.3
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 1.5e-22 109.8 117 53.8
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 5.6e-22 107.8 120 51.7
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 1.3e-21 106.7 117 51.3
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 1.6e-21 106.3 117 49.6
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 2.8e-21 105.5 117 53.0
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 2.8e-21 105.5 118 50.8
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 2.8e-21 105.5 118 50.8
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 8.1e-21 104.0 117 51.3
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 1.1e-20 103.6 117 50.4
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 1.8e-20 102.8 117 50.4
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 6.9e-20 100.9 120 53.3
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 9.0e-20 100.5 118 48.3
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 1.5e-19 99.8 117 51.3
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 7.6e-19 97.4 117 50.4
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 9.9e-19 97.1 122 48.4
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 1.3e-18 96.7 118 46.6
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 1.3e-18 96.7 117 50.4
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 1.3e-18 96.7 117 47.0
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 1.7e-18 96.3 117 47.9
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 2.9e-18 95.5 117 46.2
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 3.8e-18 95.1 116 45.7
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 3.8e-18 95.1 117 47.0
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 4.9e-18 94.7 117 46.2
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 4.9e-18 94.7 117 46.2
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 4.9e-18 94.7 124 47.6
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 6.4e-18 94.4 117 46.2
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 6.4e-18 94.4 115 48.7
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 8.4e-18 94.0 117 47.0
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 1.1e-17 93.6 121 50.4
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 1.1e-17 93.6 118 46.6
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 1.4e-17 93.2 118 47.5
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.4e-17 93.2 122 45.9
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.4e-17 93.2 118 47.5
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 2.4e-17 92.4 102 52.9
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 3.2e-17 92.0 128 42.2
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 5.4e-17 91.3 117 46.2
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 5.4e-17 91.3 118 49.2
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 5.4e-17 91.3 118 49.2
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 7.1e-17 90.9 117 45.3
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 7.1e-17 90.9 117 47.0
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 9.3e-17 90.5 130 42.3
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.2e-16 90.1 117 43.6
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 1.6e-16 89.7 117 44.4
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 2.1e-16 89.4 115 47.0
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 3.5e-16 88.6 118 48.3
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 3.5e-16 88.6 117 42.7
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 4.6e-16 88.2 115 48.7
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 4.6e-16 88.2 115 48.7
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 4.6e-16 88.2 117 45.3
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 4.6e-16 88.2 129 44.2
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 6.0e-16 87.8 117 44.4
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 6.0e-16 87.8 115 48.7
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 6.0e-16 87.8 119 42.0
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 6.0e-16 87.8 119 44.5
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 7.9e-16 87.4 119 47.1
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 1.3e-15 86.7 117 41.0
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 2.3e-15 85.9 113 44.2
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 2.3e-15 85.9 115 45.2
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 2.3e-15 85.9 118 47.5
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 2.3e-15 85.9 118 47.5
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 2.3e-15 85.9 117 42.7
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 5.1e-15 84.7 107 43.9
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 8.7e-15 84.0 118 43.2
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 1.5e-14 83.2 117 41.0
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 1.9e-14 82.8 115 46.1
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 1.9e-14 82.8 117 43.6
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 1.9e-14 82.8 117 41.9
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 3.3e-14 82.0 117 42.7
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 3.3e-14 82.0 102 46.1
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 4.3e-14 81.6 119 44.5
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 4.3e-14 81.6 117 45.3
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 5.6e-14 81.3 118 45.8
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 7.4e-14 80.9 115 41.7
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 1.6e-13 79.7 117 45.3
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 2.1e-13 79.3 122 40.2
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 2.8e-13 79.0 115 42.6
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 6.2e-13 77.8 106 41.5
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 1.1e-12 77.0 81 55.6
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 1.1e-12 77.0 116 44.0
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 1.4e-12 76.6 119 44.5
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 1.8e-12 76.3 82 53.7
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 4.0e-12 75.1 102 44.1
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 5.3e-12 74.7 82 52.4
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 6.9e-12 74.3 99 46.5
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.6e-11 72.4 102 41.2
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 3.4e-11 72.0 82 51.2
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 2.2e-10 69.3 123 36.6
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 2.9e-10 68.9 94 43.6
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 2.9e-10 68.9 70 50.0
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 2.9e-10 68.9 116 40.5
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 4.9e-10 68.2 50 66.0
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 6.4e-10 67.8 82 51.2
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 6.4e-10 67.8 82 51.2
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 9.3e-09 63.9 59 49.2
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 6.0e-08 61.2 115 36.5
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 1.3e-07 60.1 115 39.1
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 5.1e-07 58.2 113 39.8
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 1.9e-06 56.2 86 41.9
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 5.6e-06 54.7 131 32.1


User provided reference genes

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