Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g024280 Solanum pennellii HOM05D022770 ORTHO05D037648 3.7e-143 511.5 261 100.0
PGSC0003DMG400032516 Solanum tuberosum HOM05D022770 ORTHO05D037648 8.3e-42 174.9 111 82.9
PGSC0003DMG400032517 Solanum tuberosum HOM05D022770 ORTHO05D398769 7.5e-35 151.8 138 66.7
Solyc11g062290.3 Solanum lycopersicum HOM05D022770 ORTHO05D037648 2.7e-32 143.3 75 98.7
PGSC0003DMG400036772 Solanum tuberosum HOM05D000455 ORTHO05D011453 5.2e-20 102.4 117 53.0
PGSC0003DMG402032501 Solanum tuberosum HOM05D000455 ORTHO05D011453 1.4e-17 94.4 117 48.7
Nitab4.5_0000818g0040 Nicotiana tabacum HOM05D000124 ORTHO05D011453 1.6e-16 90.9 138 43.5
Nitab4.5_0004246g0040 Nicotiana tabacum HOM05D000279 ORTHO05D000957 2.1e-16 90.5 101 52.5
Sopen11g024190 Solanum pennellii HOM05D000002 ORTHO05D009653 6.0e-16 89.0 114 46.5
CAN.G869.4 Capsicum annuum HOM05D000455 ORTHO05D011453 8.6e-15 85.1 74 60.8
PGSC0003DMG400022031 Solanum tuberosum HOM05D000455 ORTHO05D011453 4.3e-14 82.8 117 47.9
PGSC0003DMG400013619 Solanum tuberosum HOM05D000455 ORTHO05D011453 7.3e-14 82.0 127 43.3
PGSC0003DMG402013613 Solanum tuberosum HOM05D000455 ORTHO05D010375 4.9e-10 69.3 55 58.2
Nitab4.5_0004806g0040 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.9e-09 67.4 146 38.4
Nitab4.5_0002766g0100 Nicotiana tabacum HOM05D000455 ORTHO05D000434 2.4e-09 67.0 148 39.2
Peaxi162Scf00029g00319 Petunia axillaris HOM05D000455 ORTHO05D011453 2.4e-09 67.0 165 37.0
Nitab4.5_0002766g0090 Nicotiana tabacum HOM05D000455 ORTHO05D010375 9.2e-09 65.1 146 36.3
PGSC0003DMG400013616 Solanum tuberosum HOM05D000455 ORTHO05D011453 2.7e-08 63.5 198 29.8
Dinv11551 Davidia involucrata HOM05D000455 ORTHO05D000434 2.3e-07 60.5 100 40.0
Nitab4.5_0004806g0030 Nicotiana tabacum HOM05D000455 ORTHO05D000434 2.3e-07 60.5 105 41.9
MSTRG.24496 Avicennia marina HOM05D000455 ORTHO05D000434 1.5e-06 57.8 132 31.8
Sopen10g019470 Solanum pennellii HOM05D000006 ORTHO05D000695 1.5e-06 57.8 83 43.4
Oeu062477.1 Olea europaea HOM05D000455 ORTHO05D000434 1.9e-06 57.4 171 33.3
Peaxi162Scf00391g00424 Petunia axillaris HOM05D000455 ORTHO05D000434 1.9e-06 57.4 60 48.3
Cc11_g02160 Coffea canephora HOM05D000455 ORTHO05D010375 3.3e-06 56.6 75 49.3
Dinv13089 Davidia involucrata HOM05D000455 ORTHO05D000434 3.3e-06 56.6 104 39.4
Aqoxy6G00618 Aquilegia oxysepala HOM05D000455 ORTHO05D000434 4.3e-06 56.2 84 40.5
Cc06_g21940 Coffea canephora HOM05D000455 ORTHO05D010375 4.3e-06 56.2 107 36.4
PGSC0003DMG400013617 Solanum tuberosum HOM05D000455 ORTHO05D011453 4.3e-06 56.2 48 58.3
MD06G1111900 Malus domestica HOM05D000455 ORTHO05D000434 5.6e-06 55.8 114 38.6
CSS0007334 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D022121 7.3e-06 55.5 105 38.1
Cc00_g29760 Coffea canephora HOM05D000455 ORTHO05D000434 7.3e-06 55.5 95 43.2
Sopen01g009580 Solanum pennellii HOM05D000006 ORTHO05D000695 7.3e-06 55.5 121 32.2
BraA03t14557Z Brassica rapa HOM05D000455 ORTHO05D000434 9.6e-06 55.1 110 31.8


User provided reference genes

Program Settings