Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 8.1e-158 560.5 302 100.0
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 5.6e-151 537.7 302 95.4
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 7.9e-145 517.3 302 92.7
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 3.7e-126 455.3 313 80.5
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 2.4e-125 452.6 306 82.0
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 4.1e-125 451.8 308 80.8
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.3e-118 430.3 310 77.1
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.5e-90 337.0 257 67.3
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 2.3e-88 329.7 259 66.8
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 3.0e-88 329.3 261 66.7
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 5.2e-88 328.6 291 62.5
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 3.4e-87 325.9 250 66.8
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 3.4e-87 325.9 291 61.9
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 4.4e-87 325.5 283 60.1
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 7.5e-87 324.7 246 69.5
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 7.5e-87 324.7 252 68.3
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 1.3e-86 323.9 266 65.4
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 2.8e-86 322.8 257 66.9
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 3.7e-86 322.4 303 60.7
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 2.4e-85 319.7 291 61.2
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 5.4e-85 318.5 246 67.5
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 5.4e-85 318.5 250 65.6
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 1.2e-84 317.4 260 65.4
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.2e-84 317.4 258 65.1
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 1.0e-83 314.3 245 66.5
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 1.1e-82 310.8 234 69.2
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 2.5e-82 309.7 260 64.2
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 7.2e-82 308.1 261 61.7
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 2.8e-81 306.2 261 60.9
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 4.7e-81 305.4 261 60.9
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 4.7e-81 305.4 261 60.9
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 6.1e-81 305.1 261 60.9
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 8.0e-81 304.7 261 60.9
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 1.4e-80 303.9 261 60.9
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 1.4e-80 303.9 266 60.9
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 2.3e-80 303.1 250 62.4
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 4.0e-80 302.4 259 61.0
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 4.0e-80 302.4 261 61.3
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 3.4e-79 299.3 261 61.3
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 2.2e-78 296.6 259 61.0
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 8.3e-78 294.7 261 60.2
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 1.4e-77 293.9 253 60.9
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 2.4e-77 293.1 300 55.7
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 2.0e-76 290.0 265 60.8
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 2.7e-76 289.7 251 61.8
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.6e-76 288.9 260 61.9
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 1.4e-72 277.3 224 64.3
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.5e-71 273.9 213 65.3
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 1.5e-71 273.9 292 55.1
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 3.7e-70 269.2 272 55.1
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 3.7e-70 269.2 207 67.6
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.4e-69 267.3 206 67.0
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 2.0e-68 263.5 216 64.8
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 2.3e-67 260.0 204 65.2
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 5.6e-66 255.4 222 63.1
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 4.0e-64 249.2 208 60.1
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 9.8e-63 244.6 234 56.8
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 4.3e-58 229.2 227 57.7
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 1.6e-57 227.3 245 51.8
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 3.6e-57 226.1 247 51.8
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 7.1e-53 211.8 158 69.0
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 5.8e-47 192.2 249 43.4
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 1.0e-43 181.4 264 40.2
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 6.6e-43 178.7 253 42.3
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 7.1e-37 158.7 114 73.7
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 6.2e-33 145.6 151 57.6
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 5.3e-32 142.5 135 59.3
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 1.2e-31 141.4 125 62.4
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 3.2e-29 133.3 94 72.3
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 6.2e-25 119.0 246 33.7
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 5.3e-24 115.9 135 54.8
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 1.5e-23 114.4 101 60.4
CAN.G271.1 Capsicum annuum HOM05D003774 ORTHO05D010174 1.1e-16 91.7 129 45.7
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 5.3e-16 89.4 91 57.1
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 8.4e-14 82.0 148 35.8
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 1.8e-08 64.3 338 23.4
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 1.2e-07 61.6 295 27.1
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 5.0e-06 56.2 50 58.0


User provided reference genes

Program Settings