Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 8.5e-128 460.3 224 100.0
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 1.0e-104 383.6 198 95.5
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 2.9e-104 382.1 198 94.4
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 2.9e-96 355.5 198 86.4
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 4.7e-94 348.2 198 86.9
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 3.0e-85 318.9 184 85.3
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 1.6e-73 280.0 199 71.9
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 9.8e-68 260.8 208 61.5
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 2.2e-67 259.6 208 61.5
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 6.4e-67 258.1 211 60.2
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.9e-66 256.5 205 62.0
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 2.4e-66 256.1 208 60.1
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 3.2e-66 255.8 208 61.5
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 9.2e-66 254.2 210 59.5
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 4.6e-65 251.9 205 62.0
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 6.0e-65 251.5 200 61.5
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 7.8e-65 251.1 208 61.1
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 7.8e-65 251.1 204 60.3
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 1.0e-64 250.8 210 58.6
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 1.3e-64 250.4 208 59.1
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 5.1e-64 248.4 212 61.3
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 1.1e-63 247.3 204 59.8
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 1.9e-63 246.5 210 58.1
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.3e-63 245.7 210 57.6
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.3e-63 245.7 210 57.6
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 3.3e-63 245.7 212 60.8
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 4.3e-63 245.4 208 59.1
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 5.6e-63 245.0 208 58.2
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 5.6e-63 245.0 210 56.7
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 7.3e-63 244.6 208 57.7
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 7.3e-63 244.6 208 59.1
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 9.5e-63 244.2 210 56.7
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 2.1e-62 243.0 209 58.9
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 2.1e-62 243.0 214 58.9
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 3.6e-62 242.3 212 57.1
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 3.6e-62 242.3 203 59.6
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 6.2e-62 241.5 208 59.1
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 8.1e-62 241.1 208 58.7
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 8.1e-62 241.1 194 61.9
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 8.1e-62 241.1 208 60.6
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.8e-61 240.0 211 60.2
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 3.1e-61 239.2 209 59.8
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 4.0e-61 238.8 204 58.3
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.0e-61 238.8 211 56.9
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 5.2e-61 238.4 208 58.7
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 8.9e-61 237.7 209 56.0
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 2.6e-60 236.1 208 57.7
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 4.4e-60 235.3 209 55.5
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 5.8e-60 235.0 208 55.8
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 5.8e-60 235.0 209 56.9
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 3.7e-59 232.3 208 58.2
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 4.9e-59 231.9 210 57.6
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 1.9e-58 229.9 203 57.1
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 1.9e-58 229.9 204 56.9
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 7.1e-58 228.0 209 54.5
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 9.2e-58 227.6 204 56.9
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 1.6e-57 226.9 209 54.5
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 1.6e-57 226.9 211 56.4
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 2.1e-57 226.5 198 57.6
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 6.0e-57 224.9 210 53.3
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 6.0e-57 224.9 210 54.8
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 7.8e-57 224.6 202 55.4
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 7.8e-57 224.6 208 55.3
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 1.0e-56 224.2 208 54.8
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 1.0e-56 224.2 208 55.3
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 1.0e-56 224.2 208 54.3
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 1.3e-56 223.8 209 53.6
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 1.3e-56 223.8 208 54.8
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 3.9e-56 222.2 207 55.6
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 1.1e-55 220.7 208 55.8
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 1.1e-55 220.7 211 54.5
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 7.3e-55 218.0 203 54.7
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 4.7e-54 215.3 211 53.6
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 8.4e-51 204.5 206 53.4
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 1.4e-50 203.8 210 50.5
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 7.8e-49 198.0 210 50.0
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 1.3e-48 197.2 209 48.8
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 5.1e-48 195.3 209 48.8
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 5.1e-48 195.3 203 51.7
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 5.1e-48 195.3 210 49.0
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 6.6e-48 194.9 210 51.4
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 1.1e-47 194.1 209 50.2
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 5.6e-47 191.8 214 47.7
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 7.3e-47 191.4 209 49.3
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.6e-46 190.3 210 51.4
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 4.8e-46 188.7 194 52.6
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 2.2e-43 179.9 207 46.9
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 7.1e-42 174.9 213 47.4
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 1.0e-40 171.0 212 47.2
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 1.0e-40 171.0 212 47.2
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 1.1e-39 167.5 191 47.6
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 2.5e-39 166.4 198 47.5
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 2.5e-39 166.4 209 43.1
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 1.3e-35 154.1 142 55.6
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 2.9e-35 152.9 142 57.7
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 3.8e-35 152.5 229 38.0
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.4e-34 150.6 100 68.0
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.5e-33 146.0 144 52.8
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.3e-32 144.1 142 53.5
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 3.7e-30 136.0 126 52.4
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 6.5e-27 125.2 210 36.7
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 4.2e-26 122.5 211 36.0
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 7.9e-25 118.2 224 36.2
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 1.3e-11 74.3 87 47.1
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 1.1e-10 71.2 117 35.9


User provided reference genes

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