Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g022190 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-92 342.8 164 100.0
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-60 236.9 129 87.6
Sopen07g021550 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-54 215.3 180 62.2
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-46 189.9 262 43.5
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-45 185.7 262 42.7
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-45 185.7 262 42.7
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-45 185.7 262 42.7
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-45 184.1 262 42.4
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 8.6e-45 184.1 262 42.4
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-45 184.1 262 42.4
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-45 184.1 262 42.4
Sopen10g020700 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-45 184.1 262 42.4
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-44 181.4 161 55.9
Sopen02g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-43 180.3 262 41.6
Sopen05g013600 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-42 177.2 262 42.0
Sopen11g020500 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-42 175.3 247 42.5
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-42 174.9 253 42.3
Sopen04g016440 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-32 142.9 260 33.5
Sopen07g019800 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-32 141.7 85 76.5
Sopen12g022630 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-23 112.8 83 59.0
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-23 112.5 97 54.6
Sopen09g020250 Solanum pennellii HOM05D000017 ORTHO05D000013 4.6e-22 108.6 83 55.4
Sopen12g007420 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-20 101.7 93 51.6
Sopen09g026440 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-19 100.1 93 50.5
Sopen01g014170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-17 93.6 94 47.9
Sopen01g024200 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-16 90.5 150 38.0
Sopen04g032910 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-16 90.5 94 43.6
Sopen05g008000 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-16 90.5 94 43.6
Sopen08g005870 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-16 90.5 94 43.6
Sopen11g013400 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-16 90.5 94 43.6
Sopen10g005650 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-16 89.7 84 47.6
Sopen07g013190 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-16 89.0 94 42.6
Nitab4.5_0006375g0060 Nicotiana tabacum HOM05D000017 ORTHO05D002765 2.4e-15 86.3 98 39.8
Nitab4.5_0015150g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-15 86.3 61 59.0
CANSAT54G0405 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-14 82.8 95 41.1
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-14 82.8 95 41.1
Sopen12g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-14 82.8 36 94.4
Nitab4.5_0000207g0340 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.5e-14 82.4 71 50.7
Sopen00g013900 Solanum pennellii HOM05D000017 ORTHO05D000013 4.6e-14 82.0 36 94.4
CANSAT54G1378 Cannabis sativa HOM05D000017 ORTHO05D000013 7.8e-14 81.3 95 38.9
Sopen10g008530 Solanum pennellii HOM05D000017 ORTHO05D000013 7.8e-14 81.3 238 29.4
CANSAT35G1386 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-13 79.7 84 41.7
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 6.6e-13 78.2 45 84.4
CANSAT78G0314 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-12 77.4 82 42.7
CANSAT01G2166 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-12 76.6 82 43.9
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-12 76.6 82 43.9
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-12 76.6 82 43.9
CANSAT54G0762 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-12 76.6 82 43.9
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-12 76.6 82 43.9
CANSAT78G1514 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-12 76.6 82 43.9
CANSAT80G0510 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-12 76.6 79 40.5
CANSAT11G0787 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-12 75.9 84 40.5
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-12 75.9 82 43.9
Nitab4.5_0000646g0240 Nicotiana tabacum HOM05D008401 ORTHO05D000013 4.3e-12 75.5 143 30.8
CANSAT01G0559 Cannabis sativa HOM05D000017 ORTHO05D000013 7.3e-12 74.7 84 39.3
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-11 73.2 84 36.9
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-11 72.8 135 34.1
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-11 72.8 135 34.1
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-11 72.8 135 34.1
CANSAT35G0491 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-10 70.9 83 39.8
CANSAT64G1570 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-10 70.9 83 39.8
CANSAT80G0876 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-10 70.9 83 39.8
CANSAT01G2730 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-10 70.5 83 39.8
CANSAT11G0851 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-10 70.5 83 38.6
CANSAT21G2295 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-10 70.5 85 42.4
CANSAT25G1251 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-10 70.5 81 40.7
CANSAT11G0224 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-10 70.1 83 39.8
CANSAT21G0526 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-10 70.1 79 40.5
CANSAT25G0281 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-10 70.1 98 37.8
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-10 68.9 82 39.0
CANSAT64G1445 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-10 68.6 86 39.5
CANSAT25G3667 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-10 68.2 86 39.5
CANSAT56G3678 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-10 68.2 86 39.5
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.2e-09 67.4 83 34.9
CANSAT56G0213 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-09 67.0 189 26.5
Nitab4.5_0000431g0290 Nicotiana tabacum HOM05D007248 ORTHO05D036936 2.0e-09 66.6 55 52.7
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 2.6e-09 66.2 83 38.6
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-09 66.2 81 38.3
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-09 66.2 87 41.4
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-09 66.2 96 33.3
CANSAT56G2625 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-09 65.9 83 37.3
Sopen05g009000 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-09 65.9 37 70.3
Sopen08g018780 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-09 65.9 37 70.3
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.4e-09 65.5 35 77.1
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 4.4e-09 65.5 35 77.1
CANSAT01G2928 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 82 37.8
CANSAT11G1657 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 82 37.8
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 82 37.8
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 82 37.8
CANSAT54G1422 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 82 37.8
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 108 31.5
CANSAT64G1909 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 86 37.2
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-09 64.3 83 32.5
CANSAT35G1835 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-09 64.3 82 36.6
CANSAT54G0096 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-09 64.3 83 32.5
CANSAT56G0518 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-09 64.3 83 32.5
CANSAT56G3886 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-09 64.3 83 32.5
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-09 64.3 83 32.5
CANSAT25G1793 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-08 63.9 83 37.3
Sopen12g021230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-08 63.9 129 35.7
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 1.7e-08 63.5 48 58.3
PGSC0003DMG400040725 Solanum tuberosum HOM05D000017 ORTHO05D000013 1.7e-08 63.5 33 78.8
THA.LOC104801724 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.7e-08 63.5 98 31.6
CANSAT25G2090 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-08 63.2 79 38.0
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-08 63.2 77 39.0
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-08 63.2 96 31.2
CANSAT78G0791 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-08 63.2 83 36.1
TWI39G1138 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.9e-08 62.8 97 35.1
THA.LOC104809906 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.8e-08 62.4 98 31.6
TWI18G0436 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-08 62.4 97 35.1
TWI77G0111 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-08 62.4 97 35.1
Atru.chr3.4260 Acer truncatum HOM05D000017 ORTHO05D000013 4.9e-08 62.0 83 34.9
CANSAT11G0986 Cannabis sativa HOM05D000017 ORTHO05D000013 4.9e-08 62.0 83 32.5
TWI63G1449 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.4e-08 61.6 97 35.1
CANSAT25G1081 Cannabis sativa HOM05D000017 ORTHO05D000013 8.4e-08 61.2 77 37.7
CANSAT80G1576 Cannabis sativa HOM05D000017 ORTHO05D000013 8.4e-08 61.2 83 31.3
CANSAT11G0629 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-07 60.8 97 32.0
CANSAT35G0089 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-07 60.8 83 31.3
TWI74G0719 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-07 60.8 97 34.0
TWI75G0439 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-07 60.8 97 33.0
TWI77G0746 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-07 60.8 99 33.3
CANSAT21G0206 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-07 60.5 83 31.3
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-07 60.1 78 33.3
TWI38G1855 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.9e-07 60.1 97 34.0
CANSAT80G1918 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-07 59.7 83 31.3
Sopen05g027300 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-07 59.3 132 34.8
Oeu010760.1 Olea europaea HOM05D000017 ORTHO05D000013 4.2e-07 58.9 84 36.9
Atru.chr3.2979 Acer truncatum HOM05D000017 ORTHO05D000013 5.4e-07 58.5 83 34.9
Atru.chr8.859 Acer truncatum HOM05D000017 ORTHO05D000013 7.1e-07 58.2 96 32.3
CANSAT01G0841 Cannabis sativa HOM05D000017 ORTHO05D000013 7.1e-07 58.2 75 33.3
CANSAT80G2222 Cannabis sativa HOM05D000017 ORTHO05D000013 7.1e-07 58.2 87 37.9
Oeu007872.1 Olea europaea HOM05D000017 ORTHO05D000013 7.1e-07 58.2 97 32.0
Sopen10g016690 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-06 57.4 59 50.8
PGSC0003DMG400045123 Solanum tuberosum HOM05D000017 ORTHO05D000013 1.2e-06 57.4 32 68.8
Atru.chr11.608 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-06 57.0 86 33.7
CANSAT01G2447 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-06 57.0 97 29.9
CANSAT80G2529 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-06 57.0 96 30.2
Oeu044755.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-06 57.0 84 36.9
MBI18_g16979_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.1e-06 56.6 96 26.0
Atru.chr7.247 Acer truncatum HOM05D000017 ORTHO05D000013 2.7e-06 56.2 86 33.7
CANSAT01G1186 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-06 56.2 97 28.9
CANSAT64G0129 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-06 56.2 63 38.1
CANSAT78G0241 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-06 55.8 97 28.9
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 91 31.9
Atru.chr1.2047 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-06 55.5 86 36.0
BolC5t32386H Brassica oleracea HOM05D000017 ORTHO05D000013 4.6e-06 55.5 66 36.4
Lj5A553T10 Lonicera japonica HOM05D000017 ORTHO05D000013 4.6e-06 55.5 116 26.7
Nitab4.5_0001115g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.6e-06 55.5 71 33.8
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 6.0e-06 55.1 94 30.9
BolC4t26055H Brassica oleracea HOM05D025516 ORTHO05D012204 6.0e-06 55.1 135 23.7
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 7.8e-06 54.7 112 28.6


User provided reference genes

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