Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g021130 Solanum pennellii HOM05D000003 ORTHO05D000006 2.3e-87 325.5 160 100.0
PGSC0003DMG400025209 Solanum tuberosum HOM05D031342 ORTHO05D011642 6.2e-16 88.2 73 60.3
PGSC0003DMG400021502 Solanum tuberosum HOM05D000003 ORTHO05D000006 2.4e-15 86.3 82 51.2
PGSC0003DMG400020312 Solanum tuberosum HOM05D000003 ORTHO05D000006 6.9e-15 84.7 242 26.4
PGSC0003DMG400001135 Solanum tuberosum HOM05D000003 ORTHO05D000006 1.0e-13 80.9 89 41.6
Sopen10g025380 Solanum pennellii HOM05D000003 ORTHO05D000006 1.1e-12 77.4 81 45.7
Sopen11g009770 Solanum pennellii HOM05D000003 ORTHO05D000006 7.1e-12 74.7 84 41.7
QL04p049443 Quercus lobata HOM05D000279 ORTHO05D000957 1.6e-11 73.6 82 42.7
CiPaw.16G055100 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.3e-09 65.9 83 37.3
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.3e-09 65.5 83 38.6
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 3.7e-08 62.4 84 36.9
Sopen01g037960 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-08 62.4 89 37.1
PGSC0003DMG400033900 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.7e-08 62.4 85 40.0
QL11p018593 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-08 61.6 84 40.5
CiPaw.07G196000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-07 60.8 83 37.3
PSO675G5677 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-07 60.8 80 37.5
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.4e-07 60.5 83 37.3
PSO724G0340 Papaver somniferum HOM05D000003 ORTHO05D000006 1.8e-07 60.1 87 33.3
PSO063G4608 Papaver somniferum HOM05D000003 ORTHO05D000006 3.1e-07 59.3 79 40.5
PGSC0003DMG400032795 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.1e-07 59.3 89 36.0
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.3e-07 58.5 84 33.3
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.9e-07 58.2 89 32.6
PSO063G1566 Papaver somniferum HOM05D000003 ORTHO05D000006 6.9e-07 58.2 83 34.9
QL04p042086 Quercus lobata HOM05D000003 ORTHO05D000006 6.9e-07 58.2 84 31.0
Sopen11g020060 Solanum pennellii HOM05D000003 ORTHO05D000004 6.9e-07 58.2 89 32.6
CiPaw.09G047300 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.0e-07 57.8 83 34.9
PSO782G3067 Papaver somniferum HOM05D000003 ORTHO05D000004 9.0e-07 57.8 85 32.9
PSO302G0095 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 80 35.0
PGSC0003DMG400015955 Solanum tuberosum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 89 34.8
CiPaw.06G068000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.5e-06 57.0 61 39.3
CiPaw.10G134600 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.4e-06 55.8 83 33.7
CiPaw.03G176000 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.5e-06 55.5 82 36.6
QL01p030568 Quercus lobata HOM05D000003 ORTHO05D000006 5.9e-06 55.1 83 36.1
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 5.9e-06 55.1 84 34.5
QL07p016620 Quercus lobata HOM05D000003 ORTHO05D000004 5.9e-06 55.1 106 32.1
CiPaw.08G026800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.0e-05 54.3 84 33.3


User provided reference genes

Program Settings