Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 2.9e-151 538.5 269 100.0
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 3.8e-143 511.5 264 96.6
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 8.9e-132 473.8 259 91.5
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 1.1e-113 413.7 248 83.5
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.2e-104 383.6 243 78.6
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 3.9e-103 378.6 247 76.9
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.8e-101 372.5 247 76.1
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 4.7e-48 195.7 258 42.6
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 1.4e-47 194.1 249 44.6
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 5.2e-47 192.2 250 45.6
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 4.5e-43 179.1 220 45.9
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 7.2e-41 171.8 252 41.7
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 9.4e-41 171.4 255 43.9
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 2.7e-40 169.9 253 43.5
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 6.1e-40 168.7 251 41.8
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 6.1e-40 168.7 272 40.4
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 1.8e-39 167.2 252 43.3
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 3.0e-39 166.4 263 41.4
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 6.8e-39 165.2 268 40.3
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 8.8e-39 164.9 227 44.5
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 8.8e-39 164.9 271 39.5
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 2.0e-38 163.7 254 40.9
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 2.6e-38 163.3 251 42.6
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 3.4e-38 162.9 257 40.5
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 9.8e-38 161.4 254 36.2
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 9.8e-38 161.4 229 44.5
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 2.2e-37 160.2 218 45.4
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 6.3e-37 158.7 262 38.5
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 8.3e-37 158.3 256 39.5
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 4.1e-36 156.0 262 39.3
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.2e-35 154.5 272 39.0
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.2e-35 154.5 259 41.3
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 1.2e-35 154.5 254 40.6
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 1.6e-35 154.1 263 41.1
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 2.7e-35 153.3 229 41.9
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 3.5e-35 152.9 261 37.5
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 5.9e-35 152.1 261 40.2
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 7.7e-35 151.8 226 41.2
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.0e-34 151.4 270 40.0
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.7e-34 150.6 257 37.7
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 2.9e-34 149.8 249 36.9
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 6.5e-34 148.7 259 37.8
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 8.6e-34 148.3 268 39.2
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.9e-33 147.1 260 36.9
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 4.2e-33 146.0 255 38.4
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 1.2e-32 144.4 263 37.6
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 1.8e-31 140.6 266 37.6
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 3.0e-31 139.8 249 39.0
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.0e-31 139.4 223 38.1
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 6.8e-31 138.7 227 37.9
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 6.8e-31 138.7 280 36.8
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.2e-30 137.9 230 38.3
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 2.6e-30 136.7 255 36.1
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 4.4e-30 136.0 254 35.8
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 4.4e-30 136.0 249 35.7
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 4.4e-30 136.0 223 37.2
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.4e-30 136.0 229 36.7
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 5.7e-30 135.6 234 37.6
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 5.7e-30 135.6 210 37.6
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 7.5e-30 135.2 262 37.8
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 9.8e-30 134.8 253 35.2
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 1.3e-29 134.4 268 37.3
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 1.3e-29 134.4 253 37.9
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 2.2e-29 133.7 216 38.4
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.8e-29 133.3 199 42.2
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 2.8e-29 133.3 260 38.1
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.1e-28 131.3 281 32.7
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.8e-28 130.6 249 33.3
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 2.4e-28 130.2 258 36.0
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 1.2e-27 127.9 272 34.9
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.7e-26 124.0 228 37.3
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 1.7e-26 124.0 243 36.2
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 2.3e-26 123.6 279 33.0
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 2.3e-26 123.6 246 36.2
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 2.9e-26 123.2 200 43.5
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 6.6e-26 122.1 235 37.0
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 2.5e-25 120.2 235 37.0
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 6.1e-24 115.5 232 33.6
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.4e-23 114.4 311 29.6
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 5.7e-22 109.0 282 31.2
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 2.2e-21 107.1 96 56.2
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 2.0e-19 100.5 118 44.9
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 2.3e-18 97.1 128 43.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 2.3e-18 97.1 128 43.0
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 2.3e-18 97.1 128 43.0
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 1.1e-17 94.7 82 53.7
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 1.1e-17 94.7 262 28.6
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 1.1e-17 94.7 247 32.0
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 1.5e-17 94.4 128 42.2
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 1.5e-17 94.4 128 42.2
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 1.9e-17 94.0 121 43.0
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 1.9e-17 94.0 79 53.2
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 2.5e-17 93.6 82 53.7
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 1.2e-16 91.3 157 36.9
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 2.1e-16 90.5 147 38.8
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 4.7e-16 89.4 269 29.7
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 6.2e-16 89.0 154 37.0
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 2.3e-15 87.0 155 37.4
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 3.1e-15 86.7 81 49.4
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 7.0e-12 75.5 74 48.6
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.9e-09 67.4 67 47.8
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 8.9e-07 58.5 65 40.0
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 3.4e-06 56.6 60 43.3
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 3.4e-06 56.6 65 38.5
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 4.4e-06 56.2 63 39.7
QL10p020791 Quercus lobata HOM05D002304 ORTHO05D002363 4.4e-06 56.2 57 45.6
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 5.8e-06 55.8 56 48.2
Potri.003G164600 Populus trichocarpa HOM05D002304 ORTHO05D002363 5.8e-06 55.8 67 43.3
Sabra03G0119800 Salix brachista HOM05D002304 ORTHO05D002363 5.8e-06 55.8 100 36.0
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 5.8e-06 55.8 67 40.3
Cpa.g.sc3.228 Carica papaya HOM05D002304 ORTHO05D002363 7.5e-06 55.5 58 46.6
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 7.5e-06 55.5 53 50.9
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 7.5e-06 55.5 53 50.9
EL10Ac6g13591 Beta vulgaris HOM05D002304 ORTHO05D002363 9.9e-06 55.1 80 36.2
CiPaw.05G103300 Carya illinoinensis HOM05D002304 ORTHO05D002363 9.9e-06 55.1 65 38.5
Nn3g17544 Nelumbo nucifera HOM05D002304 ORTHO05D002363 9.9e-06 55.1 56 48.2


User provided reference genes

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