Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 3.6e-180 634.8 319 100.0
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 2.8e-177 625.2 319 97.8
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 2.4e-168 595.5 307 95.8
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 3.0e-155 552.0 307 87.9
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 8.0e-148 527.3 307 84.7
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 4.0e-147 525.0 307 84.0
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.2e-147 524.6 307 83.7
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 3.0e-102 375.9 307 61.6
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.9e-101 373.2 302 61.6
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.5e-101 372.9 295 64.7
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.5e-101 372.9 308 60.4
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 7.4e-101 371.3 307 60.9
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 9.6e-101 370.9 309 60.5
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 9.6e-101 370.9 307 61.2
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 2.1e-100 369.8 307 60.9
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.4e-98 362.5 307 60.6
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 2.9e-97 359.4 307 59.6
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 2.9e-97 359.4 307 59.0
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 6.5e-97 358.2 307 59.3
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.4e-96 357.1 298 61.4
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 4.2e-96 355.5 302 59.3
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.2e-95 354.0 307 58.6
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.8e-94 350.1 307 56.7
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 2.3e-94 349.7 307 56.7
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 2.3e-94 349.7 331 55.9
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 1.1e-93 347.4 301 59.5
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.5e-93 347.1 307 57.0
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 3.3e-93 345.9 307 57.7
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 7.4e-93 344.7 301 57.5
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 1.6e-92 343.6 306 58.8
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 2.1e-92 343.2 304 57.2
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 3.7e-92 342.4 307 56.4
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 6.2e-92 341.7 307 58.3
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.8e-91 340.1 303 58.1
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 1.8e-91 340.1 296 60.1
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 3.1e-91 339.3 307 56.7
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 6.9e-91 338.2 307 57.7
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 2.6e-90 336.3 364 49.7
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.7e-89 333.6 306 54.2
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.7e-89 333.6 307 55.0
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.9e-89 332.8 306 55.6
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 5.0e-89 332.0 307 56.0
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.1e-88 330.9 307 57.0
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.5e-88 329.7 309 55.7
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 3.2e-88 329.3 321 54.5
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.2e-87 327.4 307 55.7
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.6e-87 327.0 306 54.6
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 2.1e-87 326.6 309 55.0
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 4.6e-87 325.5 304 56.2
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 7.9e-87 324.7 305 55.7
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 7.9e-87 324.7 307 56.0
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.0e-86 324.3 307 55.7
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.8e-86 323.6 306 55.2
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 1.8e-86 323.6 301 54.8
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.8e-86 323.6 301 54.8
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 3.0e-86 322.8 307 56.0
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 5.1e-86 322.0 307 53.1
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 6.7e-86 321.6 298 55.4
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 8.7e-86 321.2 307 56.4
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 7.4e-85 318.2 307 55.7
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 7.4e-85 318.2 307 53.1
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.8e-84 316.2 301 54.8
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 6.3e-84 315.1 306 53.6
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.4e-83 313.9 307 54.1
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 2.4e-83 313.2 307 51.5
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 3.1e-83 312.8 307 51.8
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 9.0e-83 311.2 307 53.1
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.5e-82 310.5 307 52.8
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 2.0e-82 310.1 306 53.9
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 2.0e-82 310.1 308 52.3
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 4.5e-82 308.9 309 52.8
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 4.5e-82 308.9 306 52.3
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.0e-81 307.8 305 52.1
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.3e-81 307.4 307 53.1
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 2.9e-81 306.2 311 52.4
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 6.5e-81 305.1 306 53.9
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 8.5e-81 304.7 309 53.1
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 8.5e-81 304.7 307 51.5
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 5.5e-80 302.0 295 54.9
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 1.6e-79 300.4 307 52.8
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 1.6e-79 300.4 307 52.8
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.6e-79 300.4 307 52.4
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.1e-79 300.1 278 55.0
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 8.8e-78 294.7 306 52.6
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 2.5e-77 293.1 301 52.2
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 2.5e-77 293.1 307 52.1
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 7.4e-77 291.6 311 48.9
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 1.4e-75 287.3 305 52.5
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 6.9e-75 285.0 307 47.9
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.6e-71 273.9 317 46.1
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 2.7e-71 273.1 317 46.1
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 3.9e-70 269.2 264 52.3
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 5.7e-69 265.4 307 48.5
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.2e-68 263.5 309 47.9
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 8.0e-63 245.0 250 50.8
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.6e-61 240.0 209 59.3
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 2.4e-59 233.4 271 47.2
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 2.0e-58 230.3 308 43.2
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 3.5e-58 229.6 307 46.3
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 7.7e-58 228.4 240 51.7
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.6e-55 219.5 201 56.7
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.3e-54 216.9 200 56.0
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 6.8e-54 215.3 198 60.1
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 1.2e-53 214.5 187 63.1
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.6e-53 213.4 187 62.0
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 4.7e-47 192.6 120 80.8
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 1.8e-46 190.7 134 71.6
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 2.3e-46 190.3 120 80.0
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 3.7e-44 183.0 252 40.5
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 9.2e-43 178.3 169 55.6
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 3.5e-34 149.8 192 42.7
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.0e-33 148.3 106 67.0
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 3.0e-33 146.7 307 29.0
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 4.4e-29 132.9 217 38.2
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 8.3e-28 128.6 120 56.7
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.0e-25 121.7 118 47.5
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.5e-24 117.9 121 49.6
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 4.7e-23 112.8 85 71.8
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 3.7e-20 103.2 306 26.5
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 6.4e-20 102.4 99 52.5
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 1.1e-19 101.7 69 71.0
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.4e-19 101.3 68 72.1
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 9.2e-19 98.6 263 30.8
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 2.2e-12 77.4 64 57.8
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 3.2e-11 73.6 58 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 7.3e-08 62.4 126 34.1


User provided reference genes

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