Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 7.9e-144 513.8 274 100.0
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 7.4e-134 480.7 274 94.5
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.0e-130 470.3 257 97.3
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 1.9e-76 290.0 270 59.6
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 5.2e-71 271.9 283 51.9
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 7.1e-68 261.5 252 61.1
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 7.3e-65 251.5 271 50.6
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 1.6e-64 250.4 282 51.4
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 1.5e-62 243.8 283 49.8
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 5.8e-62 241.9 284 48.6
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 1.3e-61 240.7 284 47.5
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.8e-61 239.2 285 47.0
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 4.1e-60 235.7 286 46.9
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 5.1e-58 228.8 285 45.6
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 6.6e-58 228.4 277 47.7
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 8.6e-58 228.0 285 45.6
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 2.5e-57 226.5 282 47.5
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 3.3e-57 226.1 271 47.6
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 3.3e-57 226.1 283 46.3
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 3.3e-57 226.1 273 45.8
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 4.7e-56 222.2 279 44.1
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 8.1e-56 221.5 292 45.5
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.4e-55 220.7 274 48.2
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 1.8e-55 220.3 285 46.3
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 4.0e-55 219.2 282 44.7
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 4.0e-55 219.2 281 45.2
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 5.2e-55 218.8 272 45.6
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 9.0e-55 218.0 282 44.7
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.2e-54 217.6 291 44.3
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 2.6e-54 216.5 274 50.7
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 7.6e-54 214.9 318 41.2
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 1.3e-53 214.2 282 44.3
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 1.7e-53 213.8 269 45.4
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.2e-53 213.4 273 45.8
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 2.2e-53 213.4 271 46.1
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 2.9e-53 213.0 262 48.1
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 1.1e-52 211.1 269 46.1
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.9e-52 210.3 269 45.7
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 2.4e-52 209.9 270 45.2
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 2.4e-52 209.9 283 43.8
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 3.2e-52 209.5 265 44.9
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 9.3e-52 208.0 284 43.7
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.6e-51 207.2 291 44.7
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 2.1e-51 206.8 281 43.1
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 2.7e-51 206.5 269 45.0
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 2.7e-51 206.5 270 44.8
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 3.5e-51 206.1 270 45.2
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 4.6e-51 205.7 269 43.1
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 1.0e-50 204.5 285 43.2
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 1.3e-50 204.1 272 46.0
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 8.7e-50 201.4 284 42.3
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.3e-48 197.6 294 39.8
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 1.4e-47 194.1 294 39.5
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 1.2e-46 191.0 284 39.8
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 5.8e-46 188.7 324 37.7
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 3.8e-45 186.0 262 41.6
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 8.4e-45 184.9 274 40.1
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.1e-44 184.5 300 41.0
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.1e-44 184.5 289 40.5
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 9.3e-44 181.4 356 36.5
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.6e-43 180.6 273 40.7
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 3.5e-43 179.5 288 41.3
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 7.9e-43 178.3 262 43.1
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 5.1e-42 175.6 273 39.6
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 7.4e-41 171.8 331 36.9
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 4.8e-40 169.1 196 48.0
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 1.1e-39 167.9 264 39.8
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.4e-39 166.8 158 56.3
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 2.4e-39 166.8 279 37.6
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.5e-38 164.1 306 36.9
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 4.9e-37 159.1 298 38.9
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.9e-36 157.1 290 37.9
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.9e-36 157.1 290 37.9
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.0e-34 151.4 223 42.2
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.3e-34 150.2 223 41.7
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 6.7e-34 148.7 279 36.9
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 8.7e-34 148.3 274 36.1
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 1.1e-33 147.9 273 34.8
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 1.6e-32 144.1 269 35.3
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 2.1e-32 143.7 235 39.1
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 2.8e-32 143.3 255 36.1
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.7e-32 142.9 219 42.5
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.1e-31 141.4 209 41.6
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.4e-31 140.2 128 57.8
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 1.2e-30 137.9 267 36.0
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 2.0e-30 137.1 182 44.5
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 1.3e-29 134.4 227 36.6
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.9e-29 133.3 124 54.8
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 6.5e-29 132.1 267 37.1
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 5.5e-28 129.0 142 51.4
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.6e-27 127.5 352 31.0
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 7.9e-27 125.2 163 46.0
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.3e-26 123.6 187 41.2
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 7.4e-25 118.6 128 49.2
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 3.7e-24 116.3 252 33.3
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 2.4e-23 113.6 128 48.4
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 2.2e-21 107.1 231 34.6
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 8.5e-21 105.1 131 45.8
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 4.2e-20 102.8 192 33.9
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 8.8e-18 95.1 230 33.0
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.9e-17 94.0 100 50.0
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.5e-17 93.6 114 48.2
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.4e-15 87.8 101 45.5
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 1.8e-15 87.4 205 36.6
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.8e-15 87.4 150 41.3
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 6.9e-15 85.5 97 44.3
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 1.5e-14 84.3 100 42.0
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 5.9e-14 82.4 103 43.7
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 2.9e-13 80.1 100 47.0
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.1e-12 78.2 89 47.2
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.4e-12 77.8 79 53.2
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.9e-12 77.4 57 59.6
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 2.5e-12 77.0 97 45.4
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 5.3e-07 59.3 57 49.1
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 6.9e-07 58.9 66 48.5
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 2.0e-06 57.4 45 60.0
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 5.9e-06 55.8 56 55.4


User provided reference genes

Program Settings