Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 8.9e-257 889.8 462 100.0
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 4.0e-249 864.4 462 97.4
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 6.0e-245 850.5 462 96.1
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.3e-202 709.9 465 81.7
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 1.1e-187 660.2 413 83.1
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 6.6e-167 591.3 495 63.8
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 7.3e-166 587.8 494 63.8
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 1.6e-165 586.6 467 64.0
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 2.8e-165 585.9 471 63.1
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 1.4e-164 583.6 474 64.3
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 5.2e-164 581.6 472 65.0
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.2e-163 580.5 466 65.5
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.2e-163 580.5 466 65.5
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 2.0e-163 579.7 464 64.2
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 3.4e-163 578.9 465 63.7
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 3.4e-163 578.9 466 65.9
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 1.3e-162 577.0 469 64.2
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 6.4e-162 574.7 470 65.5
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.4e-161 573.5 466 64.4
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.4e-161 573.5 464 65.9
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.4e-161 572.8 464 65.7
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.2e-161 572.4 463 65.7
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 4.1e-161 572.0 473 64.1
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 9.2e-161 570.9 465 63.7
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 5.9e-160 568.2 466 64.4
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 1.0e-159 567.4 465 63.7
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 3.0e-159 565.8 468 64.3
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 5.0e-159 565.1 465 65.8
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 1.5e-158 563.5 465 64.7
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 1.5e-158 563.5 470 63.2
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 1.6e-157 560.1 494 60.5
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 1.6e-157 560.1 486 61.5
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 3.6e-157 558.9 481 62.0
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 6.2e-157 558.1 463 63.9
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 1.8e-156 556.6 465 63.4
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 4.0e-156 555.4 472 62.5
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 5.2e-156 555.1 475 63.4
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 5.2e-156 555.1 466 63.5
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 2.0e-155 553.1 468 62.8
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 2.6e-155 552.7 463 63.1
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 4.4e-155 552.0 465 61.9
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 4.4e-155 552.0 463 63.1
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 1.7e-154 550.1 465 62.4
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 2.9e-154 549.3 467 62.3
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 8.3e-154 547.7 466 62.9
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.4e-153 547.0 466 62.7
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 3.2e-153 545.8 460 61.7
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 4.1e-153 545.4 466 62.0
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 7.0e-153 544.7 468 61.1
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 9.2e-153 544.3 466 61.6
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.7e-152 542.7 484 59.5
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 6.0e-152 541.6 466 60.9
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.0e-151 540.8 464 61.2
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 1.3e-151 540.4 467 62.1
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 3.0e-151 539.3 467 60.6
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 3.9e-151 538.9 470 61.5
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 2.5e-150 536.2 422 67.5
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 7.3e-150 534.6 462 60.6
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 1.4e-148 530.4 483 59.4
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 1.8e-148 530.0 461 60.7
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 3.1e-148 529.3 461 59.7
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 8.9e-148 527.7 461 60.5
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 2.6e-147 526.2 460 60.2
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.4e-147 525.8 462 60.2
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 4.4e-147 525.4 461 59.9
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 5.8e-147 525.0 439 63.1
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 5.8e-147 525.0 465 60.0
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 1.7e-146 523.5 465 59.8
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 2.2e-146 523.1 328 84.5
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 6.4e-146 521.5 461 60.5
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 8.3e-146 521.2 461 60.5
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.4e-145 520.4 461 59.2
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 4.1e-145 518.8 466 58.8
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 7.1e-145 518.1 465 58.9
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 7.8e-144 514.6 463 59.6
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 1.0e-143 514.2 427 63.9
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 1.3e-143 513.8 460 59.8
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 6.6e-143 511.5 482 55.4
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 3.3e-142 509.2 460 59.1
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 4.3e-142 508.8 474 57.4
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.4e-140 503.8 460 58.3
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 8.4e-138 494.6 475 55.6
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 9.2e-137 491.1 482 56.4
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 4.6e-136 488.8 430 62.1
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.1e-134 484.2 466 57.1
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 3.3e-134 482.6 347 74.9
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 6.2e-133 478.4 465 56.1
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 4.9e-130 468.8 368 63.9
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 5.4e-129 465.3 485 51.5
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 6.0e-128 461.8 474 52.5
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 1.9e-126 456.8 379 61.5
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.4e-124 450.7 466 51.7
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.8e-124 450.3 466 51.7
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 5.8e-123 445.3 458 52.2
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 1.1e-121 441.0 463 53.6
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 4.2e-121 439.1 316 70.3
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 3.6e-117 426.0 363 63.1
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 2.0e-115 420.2 331 65.9
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 2.9e-114 416.4 476 49.4
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 8.4e-114 414.8 338 63.9
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.0e-107 393.7 514 47.7
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.5e-102 377.5 321 64.2
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 3.7e-93 346.3 359 53.8
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.8e-85 320.1 348 52.3
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 9.1e-84 315.1 305 58.7
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 3.4e-83 313.2 490 38.8
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 7.7e-83 312.0 264 63.3
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 1.5e-78 297.7 218 68.3
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 5.5e-73 279.3 428 39.3
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 1.7e-66 257.7 345 45.8
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 5.4e-60 236.1 492 32.1
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 5.7e-46 189.5 490 32.2
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 3.3e-41 173.7 193 52.8
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 4.3e-41 173.3 159 56.0
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 8.0e-40 169.1 143 67.1
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 2.1e-32 144.4 501 26.9
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 5.8e-30 136.3 102 72.5
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 1.7e-26 124.8 437 28.1
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.8e-23 114.8 125 50.4
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.2e-22 112.1 84 67.9
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 2.6e-22 110.9 401 24.7
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 4.1e-20 103.6 81 61.7
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 5.4e-20 103.2 82 64.6
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.2e-19 102.1 375 29.6
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 2.1e-19 101.3 81 61.7
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 4.7e-16 90.1 99 49.5
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 3.5e-11 73.9 72 48.6
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 8.7e-10 69.3 72 45.8


User provided reference genes

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