Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 6.3e-73 277.3 139 100.0
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.3e-43 179.1 178 60.1
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 9.2e-40 167.2 169 59.8
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 2.0e-39 166.0 102 85.3
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 2.0e-39 166.0 102 85.3
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.0e-39 166.0 102 85.3
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 2.7e-39 165.6 105 83.8
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 7.8e-39 164.1 118 77.1
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.3e-38 162.5 108 77.8
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 5.0e-38 161.4 102 81.4
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.6e-38 161.0 109 78.9
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 8.6e-38 160.6 109 78.9
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 9.5e-37 157.1 102 81.4
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 6.2e-36 154.5 98 83.7
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.4e-35 153.3 125 70.4
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 4.0e-35 151.8 95 85.3
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 4.0e-35 151.8 95 85.3
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 4.0e-35 151.8 95 85.3
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.0e-35 151.8 95 85.3
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 4.0e-35 151.8 95 85.3
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 6.8e-35 151.0 103 73.8
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 2.6e-34 149.1 214 47.2
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 5.8e-34 147.9 95 82.1
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.5e-34 147.5 112 72.3
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 2.2e-33 146.0 97 80.4
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.7e-33 145.2 96 81.2
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.7e-33 145.2 95 81.1
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.9e-33 144.8 94 83.0
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.9e-33 144.8 94 83.0
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.3e-33 144.1 106 71.7
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 4.1e-32 141.7 88 85.2
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 3.5e-31 138.7 101 72.3
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 6.0e-31 137.9 101 76.2
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 1.9e-29 132.9 82 82.9
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 9.5e-29 130.6 88 77.3
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.1e-27 125.6 79 81.0
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.0e-27 125.2 86 79.1
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 6.8e-27 124.4 81 84.0
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.5e-26 123.2 90 73.3
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.2e-24 115.5 81 79.0
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 4.1e-24 115.2 73 83.6
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 9.2e-24 114.0 72 80.6
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.6e-23 113.2 73 83.6
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.6e-23 113.2 73 83.6
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 1.6e-23 113.2 73 83.6
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-23 113.2 74 82.4
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.6e-23 113.2 73 83.6
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.6e-23 113.2 73 83.6
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 2.7e-23 112.5 95 66.3
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.6e-23 111.7 92 66.3
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.0e-23 111.3 78 76.9
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.3e-22 109.4 78 75.6
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.0e-22 109.0 81 67.9
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 3.0e-22 109.0 66 83.3
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 3.9e-22 108.6 81 67.9
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 1.9e-21 106.3 96 66.7
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 3.3e-21 105.5 71 81.7
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.6e-21 104.8 142 48.6
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 9.6e-21 104.0 127 48.8
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 3.6e-20 102.1 79 70.9
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 6.2e-20 101.3 87 64.4
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.8e-19 99.8 76 72.4
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 2.4e-19 99.4 146 47.9
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 3.1e-19 99.0 61 83.6
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 6.8e-19 97.8 116 56.0
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 2.0e-18 96.3 76 69.7
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 9.9e-18 94.0 115 50.4
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-17 93.6 143 50.3
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 2.2e-17 92.8 169 39.1
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 6.4e-17 91.3 54 83.3
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 6.4e-17 91.3 64 78.1
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-17 91.3 59 81.4
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 1.1e-16 90.5 64 78.1
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 1.9e-16 89.7 66 74.2
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 4.2e-16 88.6 69 71.0
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 9.3e-16 87.4 68 67.6
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 1.2e-15 87.0 75 64.0
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.6e-15 86.7 58 75.9
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 1.3e-14 83.6 54 75.9
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.0e-14 82.4 79 59.5
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 3.9e-14 82.0 87 57.5
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 6.6e-14 81.3 56 76.8
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 8.7e-14 80.9 157 38.9
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 8.7e-14 80.9 157 38.9
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 8.7e-14 80.9 157 38.9
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 8.7e-14 80.9 157 38.9
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 8.7e-14 80.9 157 38.9
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 8.7e-14 80.9 157 38.9
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.9e-13 79.7 48 87.5
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 7.3e-13 77.8 79 58.2
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 9.6e-13 77.4 54 74.1
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.1e-11 73.9 63 63.5
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 1.4e-11 73.6 49 71.4
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 4.0e-11 72.0 83 53.0
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.5e-10 70.1 55 67.3
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 5.8e-10 68.2 39 82.1
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 5.8e-10 68.2 44 79.5
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 5.8e-10 68.2 44 79.5
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.6e-10 67.8 83 50.6
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.3e-09 67.0 100 43.0
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 1.7e-09 66.6 49 71.4
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.7e-09 66.6 48 70.8
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 4.9e-09 65.1 47 72.3
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 4.2e-08 62.0 64 54.7
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 4.2e-08 62.0 64 54.7
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 1.2e-07 60.5 64 54.7
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 1.2e-07 60.5 64 54.7
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 1.2e-07 60.5 64 54.7
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 1.2e-07 60.5 37 81.1
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 1.2e-07 60.5 81 46.9
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 1.2e-07 60.5 64 54.7
BolSC35t60715H Brassica oleracea HOM05D000963 ORTHO05D005131 4.6e-07 58.5 32 96.9
Oeu014166.1 Olea europaea HOM05D000963 ORTHO05D005131 6.0e-07 58.2 38 76.3
Potri.002G073450 Populus trichocarpa HOM05D000963 ORTHO05D005131 6.0e-07 58.2 48 62.5
vmacro21330 Vaccinium macrocarpon HOM05D000963 ORTHO05D014445 1.0e-06 57.4 43 72.1
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 1.3e-06 57.0 36 77.8
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 3.0e-06 55.8 30 86.7
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 5.1e-06 55.1 26 92.3
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 6.6e-06 54.7 59 52.5
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 8.7e-06 54.3 57 52.6


User provided reference genes

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