Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019980 Solanum pennellii HOM05D003060 ORTHO05D034007 3.2e-76 288.5 164 100.0
Sopen01g042920 Solanum pennellii HOM05D003060 ORTHO05D001716 1.8e-71 272.7 163 94.5
Solyc01g099360.3 Solanum lycopersicum HOM05D003060 ORTHO05D001716 2.1e-67 259.2 164 92.1
PGSC0003DMG402024702 Solanum tuberosum HOM05D003060 ORTHO05D001716 6.7e-66 254.2 163 79.8
Solyc11g044430.1 Solanum lycopersicum HOM05D003060 ORTHO05D034007 8.9e-50 200.7 107 94.4
CAN.G995.6 Capsicum annuum HOM05D003060 ORTHO05D034007 8.9e-42 174.1 152 62.5
Nitab4.5_0002344g0090 Nicotiana tabacum HOM05D003060 ORTHO05D001716 2.7e-38 162.5 166 59.0
Peaxi162Scf00037g00924 Petunia axillaris HOM05D003060 ORTHO05D001716 2.7e-38 162.5 166 57.2
Nitab4.5_0004754g0020 Nicotiana tabacum HOM05D003060 ORTHO05D001716 2.5e-36 156.0 167 58.1
Glyma.20G235700 Glycine max HOM05D003060 ORTHO05D001716 4.4e-09 65.5 177 34.5
Haze_04161 Corylus avellana HOM05D003060 ORTHO05D001716 1.3e-08 63.9 186 34.9
Cfa006614 Carpinus fangiana HOM05D003060 ORTHO05D001716 3.8e-08 62.4 189 32.8
Potri.005G026800 Populus trichocarpa HOM05D003060 ORTHO05D001716 3.8e-08 62.4 176 34.1
Thecc.08G198500 Theobroma cacao HOM05D003060 ORTHO05D001716 4.9e-08 62.0 122 42.6
Actinidia24646 Actinidia chinensis HOM05D003060 ORTHO05D001716 8.4e-08 61.2 171 31.6
Actinidia19785 Actinidia chinensis HOM05D003060 ORTHO05D001716 1.1e-07 60.8 165 33.9
Duzib177G0733 Durio zibethinus HOM05D003060 ORTHO05D001716 1.1e-07 60.8 171 36.3
arahy.Tifrunner.gnm1.ann1.LGT5H6 Arachis hypogaea HOM05D003060 ORTHO05D001716 2.4e-07 59.7 183 31.1
arahy.Tifrunner.gnm1.ann1.U2HTAJ Arachis hypogaea HOM05D003060 ORTHO05D001716 2.4e-07 59.7 183 31.1
Cc00_g10500 Coffea canephora HOM05D003060 ORTHO05D001716 2.4e-07 59.7 88 43.2
Manes.09G169200 Manihot esculenta HOM05D003060 ORTHO05D001716 4.2e-07 58.9 118 44.1
QL03p012691 Quercus lobata HOM05D003060 ORTHO05D001716 5.4e-07 58.5 126 38.1
CiPaw.08G163000 Carya illinoinensis HOM05D003060 ORTHO05D001716 9.3e-07 57.8 176 34.1
Duzib116G0105 Durio zibethinus HOM05D003060 ORTHO05D001716 9.3e-07 57.8 116 40.5
Gorai.009G287300 Gossypium raimondii HOM05D003060 ORTHO05D001716 1.2e-06 57.4 173 32.9
Glyma.10G152700 Glycine max HOM05D003060 ORTHO05D001716 2.1e-06 56.6 120 39.2
Lj1g0012568 Lotus japonicus HOM05D003060 ORTHO05D001716 2.1e-06 56.6 182 33.5
TWI36G0905 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 2.7e-06 56.2 66 50.0
MSTRG.20426 Avicennia marina HOM05D003060 ORTHO05D001716 6.0e-06 55.1 122 36.9


User provided reference genes

Program Settings