Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 8.7e-72 273.5 133 100.0
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 2.8e-62 241.9 133 88.7
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.4e-58 229.6 133 83.5
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 7.9e-57 223.8 133 78.9
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 78.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 78.2
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 3.3e-55 218.4 133 77.4
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 4.3e-55 218.0 133 75.2
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 77.4
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 2.8e-54 215.3 132 77.3
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 3.7e-54 214.9 132 78.8
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 6.3e-54 214.2 133 78.2
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 6.3e-54 214.2 133 75.9
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 6.3e-54 214.2 133 74.4
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 8.2e-54 213.8 133 74.4
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 1.1e-53 213.4 133 77.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.4e-53 213.0 130 77.7
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.8e-53 212.6 133 75.2
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.8e-53 212.6 131 77.9
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 5.3e-53 211.1 132 76.5
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 6.9e-53 210.7 133 76.7
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.9e-53 210.7 133 74.4
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.9e-53 210.7 133 74.4
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 6.9e-53 210.7 133 74.4
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 6.9e-53 210.7 132 78.0
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 9.1e-53 210.3 133 74.4
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 9.1e-53 210.3 133 77.4
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.2e-52 209.9 133 75.9
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.2e-52 209.9 133 77.4
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 1.2e-52 209.9 133 75.9
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.5e-52 209.5 133 75.9
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 1.5e-52 209.5 133 74.4
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 2.0e-52 209.1 133 73.7
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 2.6e-52 208.8 133 75.9
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 4.5e-52 208.0 133 72.9
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 1.0e-51 206.8 133 72.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 2.9e-51 205.3 133 74.4
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 2.9e-51 205.3 133 73.7
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 5.0e-51 204.5 114 84.2
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 6.5e-51 204.1 130 71.5
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 8.5e-51 203.8 133 70.7
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 1.9e-50 202.6 98 99.0
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 3.2e-50 201.8 134 73.9
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 5.5e-50 201.1 133 70.7
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 7.2e-50 200.7 140 70.7
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.2e-49 199.9 133 69.9
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 4.7e-49 198.0 133 68.4
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.8e-48 196.1 133 69.2
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 2.3e-48 195.7 139 70.5
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 6.7e-48 194.1 133 69.2
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 1.1e-47 193.4 133 69.2
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 2.0e-47 192.6 93 97.8
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 69.2
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 69.2
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 68.4
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 3.3e-47 191.8 133 65.4
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 68.4
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 66.9
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 1.7e-46 189.5 133 66.2
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.7e-46 189.5 116 76.7
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 3.7e-46 188.3 113 77.9
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 6.3e-46 187.6 128 66.4
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 8.2e-46 187.2 113 77.0
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.1e-45 186.8 133 66.9
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 5.3e-45 184.5 181 54.1
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.2e-44 183.3 133 64.7
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.2e-44 183.3 133 64.7
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 2.0e-44 182.6 176 54.5
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 1.0e-43 180.3 133 64.7
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 3.8e-43 178.3 133 60.2
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.9e-42 176.0 101 78.2
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 4.2e-42 174.9 139 62.6
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 1.6e-41 172.9 196 47.4
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.0e-40 170.2 106 73.6
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 1.8e-40 169.5 132 59.8
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 3.9e-40 168.3 192 51.0
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.5e-39 166.4 98 79.6
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 2.0e-39 166.0 128 62.5
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.3e-39 165.2 97 78.4
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.7e-38 162.9 127 57.5
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 4.8e-38 161.4 106 68.9
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 8.2e-38 160.6 107 67.3
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 2.4e-37 159.1 128 59.4
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 1.6e-36 156.4 95 72.6
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.3e-35 153.3 100 72.0
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 4.2e-34 148.3 116 59.5
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 4.1e-29 131.7 133 57.1
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.6e-28 129.8 133 56.4
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 3.5e-28 128.6 110 47.3
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 2.7e-25 119.0 111 48.6
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 5.2e-24 114.8 70 75.7
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 3.7e-22 108.6 128 44.5
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.1e-21 107.1 102 49.0
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 1.6e-20 103.2 109 45.0
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 7.7e-20 100.9 134 38.1
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 6.6e-19 97.8 63 76.2
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 6.8e-16 87.8 81 50.6
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.0e-11 73.9 88 42.0
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 8.6e-11 70.9 47 59.6
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 5.6e-10 68.2 64 51.6
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 1.8e-08 63.2 103 35.0
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 4.4e-07 58.5 37 64.9
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 2.9e-06 55.8 34 58.8
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 4.9e-06 55.1 40 70.0


User provided reference genes

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