Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.2e-241 839.3 401 100.0
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 8.6e-240 833.2 401 99.0
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 4.9e-203 711.1 393 86.0
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 2.2e-179 632.5 355 83.9
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 2.5e-175 619.0 325 86.8
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 5.7e-175 617.8 393 74.8
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.3e-174 616.7 378 78.0
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.1e-173 613.6 377 77.2
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.8e-173 612.8 387 75.2
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.4e-173 612.5 387 75.5
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 2.4e-173 612.5 393 74.6
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 4.1e-173 611.7 354 80.2
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 9.1e-173 610.5 394 72.8
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 9.1e-173 610.5 381 76.6
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.5e-172 609.8 380 76.1
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.6e-172 609.0 370 77.6
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 4.5e-172 608.2 381 74.3
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 5.9e-172 607.8 327 83.5
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 7.7e-172 607.4 399 74.2
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.7e-171 606.3 384 74.0
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.7e-171 606.3 353 78.8
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.2e-171 605.9 325 85.5
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 2.2e-171 605.9 371 77.4
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 2.9e-171 605.5 389 73.5
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 2.9e-171 605.5 402 72.4
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 3.8e-171 605.1 353 78.8
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 6.5e-171 604.4 317 86.8
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 1.1e-170 603.6 381 74.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.1e-170 603.6 380 75.0
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.4e-170 603.2 351 77.5
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.4e-170 603.2 381 74.0
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.9e-170 602.8 391 73.9
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.5e-170 602.4 371 76.8
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.2e-170 602.1 371 76.8
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 4.2e-170 601.7 371 76.8
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 4.2e-170 601.7 352 79.3
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 4.2e-170 601.7 384 74.7
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 5.5e-170 601.3 384 73.4
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 4.7e-169 598.2 408 71.1
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 4.7e-169 598.2 324 84.0
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 6.1e-169 597.8 330 81.5
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 7.9e-169 597.4 384 72.4
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 1.4e-168 596.7 376 75.0
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.4e-168 596.7 375 73.3
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 3.0e-168 595.5 377 73.7
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 3.9e-168 595.1 327 81.3
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 3.9e-168 595.1 393 72.5
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 8.8e-168 594.0 353 77.6
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 3.3e-167 592.0 327 82.0
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 7.4e-167 590.9 353 77.1
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 7.4e-167 590.9 366 74.9
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 1.3e-166 590.1 324 81.8
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.7e-166 589.7 349 78.8
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.7e-166 589.7 324 81.8
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.2e-166 589.3 323 82.4
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.7e-166 588.6 363 76.3
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.2e-166 587.4 407 69.3
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 1.1e-165 587.0 318 84.3
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 3.1e-165 585.5 368 75.8
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 7.0e-165 584.3 342 78.4
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 5.9e-164 581.3 333 79.3
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.0e-163 580.5 372 72.8
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.5e-162 576.6 325 79.4
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.5e-162 576.6 402 69.2
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.9e-162 576.2 316 82.0
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 4.2e-162 575.1 313 82.7
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 4.2e-162 575.1 313 82.7
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 4.2e-162 575.1 316 82.6
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 4.2e-162 575.1 321 79.1
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 4.2e-162 575.1 378 70.6
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 5.5e-162 574.7 391 71.4
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 1.6e-161 573.2 356 76.7
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 2.1e-161 572.8 368 73.6
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 2.1e-161 572.8 368 73.9
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.8e-160 569.7 338 76.9
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 5.2e-160 568.2 316 82.0
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.1e-159 567.0 404 66.8
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.0e-159 566.2 393 68.7
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 2.6e-159 565.8 395 67.3
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.8e-157 559.7 342 75.7
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 2.4e-157 559.3 317 80.8
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.2e-156 557.0 382 71.5
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 1.0e-155 553.9 320 77.8
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.1e-153 546.2 295 82.0
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 4.4e-151 538.5 384 68.8
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.7e-150 536.6 327 74.6
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 2.0e-148 529.6 293 79.9
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 2.9e-147 525.8 358 70.7
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 2.1e-145 519.6 395 66.1
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.3e-142 510.4 314 72.6
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 2.7e-140 502.7 283 78.4
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 5.9e-140 501.5 318 69.2
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.3e-139 500.4 310 71.0
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.7e-139 500.0 334 67.4
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.9e-138 496.5 320 71.6
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 8.6e-131 471.1 614 45.1
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.1e-130 470.7 316 67.1
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 8.6e-123 444.5 270 80.0
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 4.0e-120 435.6 245 80.0
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 2.4e-104 383.3 270 68.1
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 8.7e-99 364.8 225 77.3
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 4.3e-98 362.5 284 61.6
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.1e-89 333.6 352 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 9.0e-80 301.6 348 42.2
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.9e-78 296.6 299 47.5
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.9e-77 293.9 300 47.7
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 6.5e-70 268.9 163 76.7
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.4e-59 234.6 191 61.3
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 2.0e-55 220.7 200 53.0
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 7.7e-55 218.8 123 75.6
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 2.1e-52 210.7 319 39.8
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.2e-47 194.9 158 60.8
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 5.9e-47 192.6 204 51.5
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 3.8e-46 189.9 196 44.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 8.3e-33 145.6 83 78.3
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 7.8e-23 112.5 70 68.6
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 9.8e-18 95.5 79 58.2
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 5.2e-11 73.2 74 55.4
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 3.4e-10 70.5 38 76.3
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.4e-08 64.3 83 38.6
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 1.2e-07 62.0 112 33.0
Cfa005891 Carpinus fangiana HOM05D000363 ORTHO05D000236 2.0e-07 61.2 127 28.3
Haze_06505 Corylus avellana HOM05D000363 ORTHO05D000236 2.0e-07 61.2 192 26.0
Aqoxy4G01160 Aquilegia oxysepala HOM05D000363 ORTHO05D000236 2.3e-06 57.8 99 30.3
Migut.M01182 Erythranthe guttata HOM05D000363 ORTHO05D000236 2.3e-06 57.8 107 32.7
Ca_18522_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 3.0e-06 57.4 122 32.0
Ca_29900_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 3.0e-06 57.4 122 32.0
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 3.9e-06 57.0 91 35.2
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 8.6e-06 55.8 121 28.9


User provided reference genes

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