Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019740 Solanum pennellii HOM05D001826 ORTHO05D007448 4.2e-110 401.4 201 100.0
CAN.G336.1 Capsicum annuum HOM05D001826 ORTHO05D007448 3.2e-70 268.9 198 73.7
Nitab4.5_0000001g0390 Nicotiana tabacum HOM05D001826 ORTHO05D007448 9.8e-67 257.3 187 75.9
Nitab4.5_0001093g0060 Nicotiana tabacum HOM05D001826 ORTHO05D007448 1.3e-66 256.9 176 79.5
Peaxi162Scf00152g00737 Petunia axillaris HOM05D001826 ORTHO05D007448 1.0e-63 247.3 162 81.5
Lj5A224T62 Lonicera japonica HOM05D001826 ORTHO05D007448 1.9e-46 189.9 196 57.7
Dinv08956 Davidia involucrata HOM05D001826 ORTHO05D007448 9.8e-43 177.6 205 50.2
Actinidia00328 Actinidia chinensis HOM05D001826 ORTHO05D007448 5.4e-41 171.8 203 53.7
CSS0011209 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 5.1e-39 165.2 206 50.0
MSTRG.20246 Avicennia marina HOM05D001826 ORTHO05D007448 1.5e-38 163.7 203 52.7
CSS0001920 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 4.3e-38 162.2 203 51.7
CSS0031120 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 4.3e-38 162.2 203 51.7
DCAR_021888 Daucus carota HOM05D001826 ORTHO05D007448 7.3e-38 161.4 189 52.4
CSS0048830 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 4.7e-37 158.7 181 53.0
Migut.B00510 Erythranthe guttata HOM05D001826 ORTHO05D007448 1.4e-36 157.1 203 52.7
QL11p027607 Quercus lobata HOM05D001826 ORTHO05D007448 6.8e-36 154.8 202 51.0
Oeu014210.1 Olea europaea HOM05D001826 ORTHO05D007448 2.0e-35 153.3 191 53.4
GSVIVG01005667001 Vitis vinifera HOM05D001826 ORTHO05D007448 5.8e-35 151.8 206 47.1
PSO761G0577 Papaver somniferum HOM05D001826 ORTHO05D007448 9.9e-35 151.0 183 53.0
PSO210G3732 Papaver somniferum HOM05D001826 ORTHO05D007448 1.7e-34 150.2 183 53.0
CANSAT54G1166 Cannabis sativa HOM05D001826 ORTHO05D007448 2.2e-34 149.8 193 51.3
Prupe.8G077000 Prunus persica HOM05D001826 ORTHO05D007448 2.2e-34 149.8 188 51.1
Haze_10373 Corylus avellana HOM05D001826 ORTHO05D007448 2.9e-34 149.4 206 46.6
MD10G1058200 Malus domestica HOM05D001826 ORTHO05D007448 6.4e-34 148.3 163 55.8
FvH4_2g11000 Fragaria vesca HOM05D001826 ORTHO05D007448 8.3e-34 147.9 189 49.7
TAR381G0061 Trochodendron aralioides HOM05D001826 ORTHO05D007448 8.3e-34 147.9 191 49.7
TAR381G1682 Trochodendron aralioides HOM05D001826 ORTHO05D007448 1.4e-33 147.1 191 49.7
TAR625G0568 Trochodendron aralioides HOM05D001826 ORTHO05D007448 1.9e-33 146.7 207 47.8
RcHm_v2.0_Chr6g0269211 Rosa chinensis HOM05D001826 ORTHO05D007448 7.1e-33 144.8 189 49.2
Cc02_g20480 Coffea canephora HOM05D001826 ORTHO05D007448 1.2e-32 144.1 190 50.0
PGR042G3754 Punica granatum HOM05D001826 ORTHO05D007448 1.2e-32 144.1 203 46.8
SGA_v2.0_scaffold32G12958 Striga asiatica HOM05D001826 ORTHO05D007448 1.2e-32 144.1 184 52.2
Cfa004776 Carpinus fangiana HOM05D001826 ORTHO05D007448 1.6e-32 143.7 206 46.1
MD05G1050600 Malus domestica HOM05D001826 ORTHO05D007448 2.1e-32 143.3 163 54.0
MBI16_g26724_MAGBIO Magnolia biondii HOM05D001826 ORTHO05D007448 3.5e-32 142.5 168 53.6
Gohir.D02G234000 Gossypium hirsutum HOM05D001826 ORTHO05D007448 4.6e-32 142.1 196 49.0
SalBow6G1497 Salvia bowleyana HOM05D001826 ORTHO05D007448 4.6e-32 142.1 203 49.3
Eucgr.G01108 Eucalyptus grandis HOM05D001826 ORTHO05D007448 6.0e-32 141.7 204 47.5
Gorai.005G262000 Gossypium raimondii HOM05D001826 ORTHO05D007448 7.8e-32 141.4 196 49.0
Gohir.A03G212500 Gossypium hirsutum HOM05D001826 ORTHO05D007448 1.3e-31 140.6 191 48.7
Lsat_1_v5_gn_7_83220 Lactuca sativa HOM05D001826 ORTHO05D007448 1.3e-31 140.6 165 55.2
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 1.7e-31 140.2 144 58.3
EL10Ac9g22137 Beta vulgaris HOM05D001826 ORTHO05D007448 2.3e-31 139.8 127 60.6
BcaB01g01839 Brassica carinata HOM05D001826 ORTHO05D007448 3.0e-31 139.4 200 49.0
FAN24G1862 Fragaria x ananassa HOM05D001826 ORTHO05D007448 3.0e-31 139.4 200 47.0
Carub.0006s3276 Capsella rubella HOM05D001826 ORTHO05D007448 3.9e-31 139.0 204 46.6
Manes.10G091900 Manihot esculenta HOM05D001826 ORTHO05D007448 3.9e-31 139.0 124 61.3
unitig_46.g18834 Utricularia gibba HOM05D001826 ORTHO05D007448 5.1e-31 138.7 127 64.6
Nn1g05773 Nelumbo nucifera HOM05D001826 ORTHO05D007448 8.6e-31 137.9 169 53.8
Thecc.02G037000 Theobroma cacao HOM05D001826 ORTHO05D007448 1.1e-30 137.5 166 53.6
Aa31LG9G9650 Aethionema arabicum HOM05D001826 ORTHO05D007448 1.5e-30 137.1 206 47.1
Thhalv10028445m.g Eutrema salsugineum HOM05D001826 ORTHO05D007448 1.5e-30 137.1 202 49.0
Potri.009G080800 Populus trichocarpa HOM05D001826 ORTHO05D007448 1.5e-30 137.1 190 45.8
ClCG09G016370 Citrullus lanatus HOM05D001826 ORTHO05D007448 1.9e-30 136.7 111 66.7
AUR62027069 Chenopodium quinoa HOM05D001826 ORTHO05D007448 2.5e-30 136.3 79 87.3
CDE04G3474 Ceratophyllum demersum HOM05D001826 ORTHO05D007448 3.3e-30 136.0 154 52.6
THA.LOC104813027 Tarenaya hassleriana HOM05D001826 ORTHO05D007448 3.3e-30 136.0 205 45.9
vmacro01904 Vaccinium macrocarpon HOM05D001826 ORTHO05D007448 4.3e-30 135.6 213 45.1
AUR62030910 Chenopodium quinoa HOM05D001826 ORTHO05D007448 5.6e-30 135.2 79 84.8
Sp6g04130 Schrenkiella parvula HOM05D001826 ORTHO05D007448 7.3e-30 134.8 200 48.0
AL6G48340 Arabidopsis lyrata HOM05D001826 ORTHO05D007448 9.5e-30 134.4 206 47.1
TWI59G0620 Tripterygium wilfordii HOM05D001826 ORTHO05D007448 9.5e-30 134.4 198 45.5
Aqoxy7G00079 Aquilegia oxysepala HOM05D001826 ORTHO05D007448 1.2e-29 134.0 167 56.3
CDE02G4107 Ceratophyllum demersum HOM05D001826 ORTHO05D007448 1.2e-29 134.0 169 50.3
AT4G04850 Arabidopsis thaliana HOM05D001826 ORTHO05D007448 1.6e-29 133.7 206 47.6
CARHR252720 Cardamine hirsuta HOM05D001826 ORTHO05D007448 1.6e-29 133.7 104 69.2
MELO3C018570.2 Cucumis melo HOM05D001826 ORTHO05D007448 1.6e-29 133.7 112 66.1
CsaV3_7G007280 Cucumis sativus L. HOM05D001826 ORTHO05D007448 1.6e-29 133.7 106 68.9
ECA236G4009 Erigeron canadensis HOM05D001826 ORTHO05D007448 1.6e-29 133.7 99 71.7
FAN20G0276 Fragaria x ananassa HOM05D001826 ORTHO05D007448 2.1e-29 133.3 214 43.9
Oeu025232.1 Olea europaea HOM05D001826 ORTHO05D007448 2.1e-29 133.3 101 71.3
BcaC04g21330 Brassica carinata HOM05D001826 ORTHO05D007448 2.8e-29 132.9 200 47.5
HanXRQChr08g0227131 Helianthus annuus HOM05D001826 ORTHO05D007448 2.8e-29 132.9 171 51.5
Sed0020177 Sechium edule HOM05D001826 ORTHO05D007448 2.8e-29 132.9 106 67.0
Hund06483 Selenicereus undatus HOM05D001826 ORTHO05D007448 2.8e-29 132.9 199 46.2
Ah.01g024250 Amaranthus hybridus HOM05D001826 ORTHO05D007448 3.6e-29 132.5 81 81.5
A09p26080 Brassica napus HOM05D001826 ORTHO05D007448 3.6e-29 132.5 104 68.3
BolC9t56144H Brassica oleracea HOM05D001826 ORTHO05D007448 3.6e-29 132.5 200 47.5
BraA09t38175Z Brassica rapa HOM05D001826 ORTHO05D007448 3.6e-29 132.5 104 68.3
ATR0767G253 Amborella trichopoda HOM05D001826 ORTHO05D007448 4.7e-29 132.1 104 66.3
C09p33100 Brassica napus HOM05D001826 ORTHO05D007448 6.2e-29 131.7 137 57.7
Sc13g0008110 Simmondsia chinensis HOM05D001826 ORTHO05D007448 6.2e-29 131.7 106 67.9
arahy.Tifrunner.gnm1.ann1.2GZ3LH Arachis hypogaea HOM05D001826 ORTHO05D007448 1.1e-28 131.0 120 61.7
Os12g0617800 Oryza sativa ssp. japonica HOM05D001826 ORTHO05D007448 1.1e-28 131.0 124 58.9
Atru.chr6.1383 Acer truncatum HOM05D001826 ORTHO05D007448 1.4e-28 130.6 202 44.1
Duzib248G0138 Durio zibethinus HOM05D001826 ORTHO05D007448 2.4e-28 129.8 201 45.3
arahy.Tifrunner.gnm1.ann1.P6A6TR Arachis hypogaea HOM05D001826 ORTHO05D007448 5.2e-28 128.6 95 72.6
Glyma.08G064600 Glycine max HOM05D001826 ORTHO05D007448 5.2e-28 128.6 162 52.5
CiPaw.05G025600 Carya illinoinensis HOM05D001826 ORTHO05D007448 6.8e-28 128.3 92 70.7
Ca_18419_v3 Cicer arietinum L. HOM05D001826 ORTHO05D007448 6.8e-28 128.3 79 84.8
Ca_18434_v3 Cicer arietinum L. HOM05D001826 ORTHO05D007448 6.8e-28 128.3 79 84.8
Lj4g0008995 Lotus japonicus HOM05D001826 ORTHO05D007448 6.8e-28 128.3 164 49.4
arahy.Tifrunner.gnm1.ann1.HUBH2G Arachis hypogaea HOM05D001826 ORTHO05D007448 8.9e-28 127.9 170 50.0
TPR.G16905 Trifolium pratense HOM05D001826 ORTHO05D007448 8.9e-28 127.9 161 52.2
Glyma.07G184800 Glycine max HOM05D001826 ORTHO05D007448 1.5e-27 127.1 179 48.0
Lalb_Chr09g0327001 Lupinus albus HOM05D001826 ORTHO05D007448 1.5e-27 127.1 206 42.2
Medtr4g092790 Medicago truncatula HOM05D001826 ORTHO05D007448 2.0e-27 126.7 161 50.9
Psat7g103920 Pisum sativum HOM05D001826 ORTHO05D007448 2.6e-27 126.3 79 82.3
HPP92_019547 Vanilla planifolia HOM05D001826 ORTHO05D007448 2.6e-27 126.3 78 80.8
Ciclev10027852m.g Citrus clementina HOM05D001826 ORTHO05D007448 3.4e-27 125.9 192 45.8
Phvul.002G216200 Phaseolus vulgaris HOM05D001826 ORTHO05D007448 4.4e-27 125.6 165 50.9
Zm00001eb134700 Zea mays HOM05D001826 ORTHO05D007448 8.4e-26 121.3 98 67.3
Mapoly0035s0114 Marchantia polymorpha HOM05D001826 ORTHO05D007448 2.5e-22 109.8 99 60.6
AagrBONN_evm.TU.Sc2ySwM_369.491 Anthoceros agrestis HOM05D001826 ORTHO05D007448 5.6e-22 108.6 139 46.0
Pp3c24_12350 Physcomitrium patens HOM05D001826 ORTHO05D007448 4.7e-21 105.5 96 61.5
Pp3c8_16170 Physcomitrium patens HOM05D001826 ORTHO05D007448 4.7e-21 105.5 115 53.0
SMO147G0144 Selaginella moellendorffii HOM05D001826 ORTHO05D007448 2.0e-19 100.1 67 71.6
CBR_g8371 Chara braunii HOM05D001826 ORTHO05D007448 4.4e-19 99.0 99 50.5
Cre16.g687450 Chlamydomonas reinhardtii HOM05D001826 ORTHO05D007448 5.3e-12 75.5 60 58.3
Glyma.10G110951 Glycine max HOM05D001826 ORTHO05D007448 3.2e-09 66.2 35 88.6
arahy.Tifrunner.gnm1.ann1.Z2GU4A Arachis hypogaea HOM05D001826 ORTHO05D007448 4.2e-09 65.9 34 91.2


User provided reference genes

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