Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.8e-276 955.3 470 100.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 5.1e-268 927.2 466 97.9
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 4.5e-240 834.3 470 87.9
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.0e-236 823.2 470 87.2
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.6e-227 792.0 500 81.2
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.2e-211 740.0 425 84.0
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 2.9e-210 735.3 447 79.6
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 6.0e-208 727.6 452 79.4
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 8.6e-207 723.8 421 82.7
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.5e-206 723.0 450 77.3
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 3.3e-206 721.8 424 81.4
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 5.6e-206 721.1 427 82.2
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 2.8e-205 718.8 425 82.1
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 3.6e-205 718.4 428 81.5
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 4.4e-203 711.4 422 80.8
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.7e-202 709.5 423 80.4
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 3.7e-202 708.4 423 80.4
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 4.9e-202 708.0 425 80.0
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 6.4e-202 707.6 422 80.1
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.9e-201 706.1 445 76.9
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 2.4e-201 705.7 447 76.7
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 3.2e-201 705.3 446 76.5
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 7.1e-201 704.1 422 80.1
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 7.1e-201 704.1 422 80.1
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 7.1e-201 704.1 421 80.3
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 3.5e-200 701.8 479 73.5
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.0e-199 698.7 422 79.4
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 5.1e-199 698.0 448 76.3
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.9e-198 696.0 426 77.5
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 2.5e-198 695.7 451 75.2
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 5.6e-198 694.5 460 73.0
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 5.6e-198 694.5 423 78.3
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 3.6e-197 691.8 458 74.9
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 6.2e-197 691.0 420 78.1
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 6.2e-197 691.0 488 70.3
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 2.4e-196 689.1 421 78.1
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 3.1e-196 688.7 420 78.1
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 5.2e-196 688.0 425 76.5
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 8.9e-196 687.2 445 75.5
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 2.6e-195 685.6 423 79.0
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.2e-194 682.6 448 75.0
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.9e-194 682.2 421 76.5
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 3.8e-194 681.8 422 76.8
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 4.9e-194 681.4 446 75.3
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 4.9e-194 681.4 420 76.9
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 1.4e-193 679.9 418 77.8
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.9e-193 679.5 425 77.6
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 3.2e-193 678.7 420 76.4
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 3.2e-193 678.7 419 77.6
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.2e-192 676.8 419 77.1
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 2.1e-192 676.0 420 76.4
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 2.7e-192 675.6 420 76.9
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 4.6e-192 674.9 422 76.3
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 7.8e-192 674.1 420 76.0
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 7.8e-192 674.1 419 76.8
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 3.0e-191 672.2 420 75.7
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 3.0e-191 672.2 420 75.7
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 1.5e-190 669.8 421 76.7
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 9.6e-190 667.2 422 75.8
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 5.2e-188 661.4 424 75.2
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 8.4e-186 654.1 420 76.0
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 1.0e-183 647.1 453 70.6
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 2.3e-183 646.0 478 68.4
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 2.1e-181 639.4 430 72.3
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 5.3e-180 634.8 447 71.8
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 9.0e-180 634.0 378 80.4
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 3.4e-179 632.1 419 73.3
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 3.4e-179 632.1 420 74.3
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 4.5e-179 631.7 382 79.3
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 5.8e-179 631.3 383 79.1
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 8.4e-178 627.5 437 71.2
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 3.2e-177 625.5 383 77.5
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 3.2e-177 625.5 380 79.5
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 7.4e-174 614.4 383 76.8
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.6e-173 613.2 437 73.2
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 4.8e-173 611.7 379 76.5
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 7.9e-168 594.3 422 68.7
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 5.1e-167 591.7 333 84.7
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.8e-164 583.2 386 72.5
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.5e-163 580.1 422 69.9
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 2.0e-163 579.7 410 69.5
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.3e-159 566.2 419 67.1
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 6.7e-159 564.7 426 66.2
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 3.1e-156 555.8 419 64.0
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.4e-151 540.4 350 74.9
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 3.0e-151 539.3 419 62.3
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 5.1e-151 538.5 399 67.4
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 8.8e-151 537.7 424 64.4
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 6.1e-144 515.0 314 79.0
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 2.3e-143 513.1 326 74.2
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 4.7e-136 488.8 428 58.6
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.0e-135 487.6 304 81.9
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 3.3e-126 456.1 428 56.1
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.7e-117 427.2 460 48.7
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 8.6e-114 414.8 202 98.5
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 5.0e-106 389.0 245 75.9
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 9.5e-97 358.2 436 45.9
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.3e-90 337.8 296 60.1
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 5.1e-90 335.9 296 60.1
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 3.9e-82 309.7 262 58.0
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 2.1e-80 303.9 223 71.3
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 4.6e-75 286.2 211 67.8
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.6e-67 261.2 179 70.4
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 8.1e-64 248.8 307 49.2
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 1.0e-58 231.9 435 38.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 2.1e-56 224.2 162 67.9
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 5.7e-41 172.9 85 100.0
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 2.5e-36 157.5 93 80.6
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 7.2e-36 156.0 105 67.6
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 5.0e-29 133.3 91 73.6
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 9.7e-17 92.4 67 65.7
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 3.2e-12 77.4 43 86.0
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.4e-07 61.2 57 54.4
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 4.1e-07 60.5 246 23.6


User provided reference genes

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