Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019160 Solanum pennellii HOM05D011389 ORTHO05D006108 4.9e-109 397.9 211 100.0
Solyc11g042800.2 Solanum lycopersicum HOM05D011389 ORTHO05D006108 7.3e-105 384.0 211 96.7
PGSC0003DMG400020976 Solanum tuberosum HOM05D011389 ORTHO05D006108 3.1e-71 272.3 364 50.0
Peaxi162Scf00078g00310 Petunia axillaris HOM05D011389 ORTHO05D006108 2.9e-53 212.6 391 40.7
Nitab4.5_0011622g0020 Nicotiana tabacum HOM05D011389 ORTHO05D006108 6.9e-47 191.4 116 87.9
SGA_v2.0_scaffold118G32589 Striga asiatica HOM05D011389 ORTHO05D006108 2.8e-24 116.3 123 52.8
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.5e-21 105.1 115 56.5
Peaxi162Scf00078g00039 Petunia axillaris HOM05D011389 ORTHO05D006108 7.2e-20 101.7 318 31.1
CAN.G379.27 Capsicum annuum HOM05D011389 ORTHO05D006108 4.7e-19 99.0 65 83.1
vmacro08809 Vaccinium macrocarpon HOM05D011389 ORTHO05D006108 2.0e-17 93.6 83 60.2
Sc02g0001270 Simmondsia chinensis HOM05D006485 ORTHO05D006108 4.8e-16 89.0 101 49.5
Ah.15g091240 Amaranthus hybridus HOM05D011389 ORTHO05D006108 1.8e-15 87.0 108 46.3
Migut.C01359 Erythranthe guttata HOM05D011389 ORTHO05D006108 1.8e-15 87.0 96 55.2
Nitab4.5_0011622g0030 Nicotiana tabacum HOM05D011389 ORTHO05D006108 5.3e-15 85.5 89 59.6
Lj3A1005G41 Lonicera japonica HOM05D011389 ORTHO05D006108 1.5e-12 77.4 77 58.4
Lj3C1005T3 Lonicera japonica HOM05D011389 ORTHO05D006108 1.5e-12 77.4 77 58.4
Actinidia32467 Actinidia chinensis HOM05D011389 ORTHO05D006108 1.6e-11 73.9 88 50.0
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 6.1e-11 72.0 100 45.0
Hund12313 Selenicereus undatus HOM05D006485 ORTHO05D006108 5.2e-10 68.9 95 48.4
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 7.5e-09 65.1 90 45.6
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 4.8e-08 62.4 59 61.0
BcaB06g28954 Brassica carinata HOM05D006485 ORTHO05D006108 1.8e-07 60.5 67 50.7
BolC4t28034H Brassica oleracea HOM05D006485 ORTHO05D006108 1.8e-07 60.5 67 50.7
CSS0031113 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 1.8e-07 60.5 115 38.3
FAN05G3442 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.8e-07 60.5 86 41.9
PGR142G2869 Punica granatum HOM05D011389 ORTHO05D006108 2.4e-07 60.1 110 34.5
FAN05G4746 Fragaria x ananassa HOM05D006485 ORTHO05D006108 3.1e-07 59.7 84 44.0
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 7.0e-07 58.5 90 42.2
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 9.1e-07 58.2 64 50.0
AT2G36640 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.6e-06 57.4 41 70.7
BcaB06g28951 Brassica carinata HOM05D006485 ORTHO05D006108 1.6e-06 57.4 55 58.2
BcaC02g07584 Brassica carinata HOM05D006485 ORTHO05D006108 1.6e-06 57.4 101 37.6
A04p28050 Brassica napus HOM05D006485 ORTHO05D006108 1.6e-06 57.4 41 70.7
FvH4_6g17400 Fragaria vesca HOM05D006485 ORTHO05D006108 1.6e-06 57.4 88 42.0
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.6e-06 57.4 88 42.0
C04p65460 Brassica napus HOM05D006485 ORTHO05D006108 2.7e-06 56.6 40 70.0
BraA04t18292Z Brassica rapa HOM05D006485 ORTHO05D006108 2.7e-06 56.6 40 70.0
CiPaw.10G003000 Carya illinoinensis HOM05D006485 ORTHO05D006108 2.7e-06 56.6 128 35.2
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 4.5e-06 55.8 60 55.0
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 7.7e-06 55.1 41 68.3


User provided reference genes

Program Settings