Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.3e-158 561.6 277 100.0
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 7.4e-158 560.5 277 99.6
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 2.7e-152 542.0 277 96.8
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 3.6e-136 488.4 284 86.3
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.4e-132 475.7 294 85.4
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.1e-132 475.3 293 85.0
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 4.5e-131 471.5 288 85.4
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.7e-112 408.3 287 73.2
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.1e-111 407.1 287 73.2
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 1.5e-110 403.3 285 73.3
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 8.3e-109 397.5 282 73.8
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 4.1e-108 395.2 282 73.8
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.6e-107 393.3 228 84.6
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 2.7e-107 392.5 285 71.2
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 1.0e-106 390.6 286 72.4
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.3e-106 390.2 281 73.3
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 5.1e-106 388.3 233 83.7
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 8.6e-106 387.5 258 76.7
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.1e-105 387.1 267 74.9
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.5e-105 386.7 268 73.9
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.9e-105 386.3 229 83.8
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.9e-105 386.3 229 83.0
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.3e-105 385.6 282 72.7
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 3.3e-105 385.6 269 74.0
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 7.3e-105 384.4 256 75.8
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 9.5e-105 384.0 234 81.6
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 9.5e-105 384.0 287 71.1
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 9.5e-105 384.0 273 74.0
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.1e-104 382.9 229 83.0
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 2.1e-104 382.9 260 75.0
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 2.1e-104 382.9 279 71.7
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.8e-104 382.5 233 82.0
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 3.6e-104 382.1 231 81.0
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 3.6e-104 382.1 224 84.4
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 4.7e-104 381.7 226 82.7
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 6.2e-104 381.3 229 83.0
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 6.2e-104 381.3 270 73.0
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 6.2e-104 381.3 284 70.8
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 8.1e-104 380.9 230 81.3
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.1e-103 380.6 283 71.0
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.1e-103 380.6 283 71.0
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.1e-103 380.6 257 76.3
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 1.8e-103 379.8 267 72.3
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.8e-103 379.8 215 86.0
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 1.8e-103 379.8 236 79.2
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 2.3e-103 379.4 235 80.4
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 6.8e-103 377.9 268 73.9
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.5e-102 376.7 291 69.1
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 2.0e-102 376.3 255 74.1
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.0e-102 376.3 227 82.4
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 2.6e-102 375.9 228 81.1
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 2.6e-102 375.9 238 78.6
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 2.6e-102 375.9 227 82.8
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 3.4e-102 375.6 233 79.8
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 3.4e-102 375.6 298 68.5
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 4.4e-102 375.2 236 79.7
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 4.4e-102 375.2 236 79.7
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 5.8e-102 374.8 289 68.9
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 5.8e-102 374.8 268 73.5
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 9.9e-102 374.0 228 81.1
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 9.9e-102 374.0 343 62.1
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 9.9e-102 374.0 236 80.1
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 9.9e-102 374.0 232 80.6
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.7e-101 373.2 260 72.3
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.7e-101 373.2 230 83.0
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.7e-101 373.2 292 68.8
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.2e-101 372.9 324 65.1
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.2e-101 372.9 228 81.1
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 2.9e-101 372.5 278 69.8
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 3.7e-101 372.1 225 81.8
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 8.4e-101 370.9 289 69.2
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.9e-100 369.8 233 80.3
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 1.9e-100 369.8 279 69.5
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.9e-100 369.8 256 75.4
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 2.4e-100 369.4 233 79.0
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 2.4e-100 369.4 270 69.6
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 3.2e-100 369.0 235 77.4
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.2e-99 367.1 233 79.0
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.7e-99 365.9 234 77.8
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 7.8e-99 364.4 235 77.0
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 3.0e-98 362.5 273 69.2
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 5.1e-98 361.7 272 70.6
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 6.6e-98 361.3 226 79.6
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 8.6e-98 360.9 249 73.5
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 8.6e-98 360.9 249 73.5
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.5e-97 359.4 249 73.1
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 4.3e-97 358.6 235 75.7
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 2.8e-96 355.9 238 75.6
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 3.1e-95 352.4 267 68.2
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.5e-94 350.1 369 56.1
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 2.6e-94 349.4 301 62.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 5.8e-94 348.2 233 75.1
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 7.6e-94 347.8 241 72.2
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 2.9e-93 345.9 206 82.0
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 8.4e-93 344.4 227 74.0
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.1e-92 344.0 228 73.7
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 5.8e-86 321.6 256 64.1
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.2e-85 319.7 234 68.8
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 8.4e-85 317.8 296 60.5
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.5e-81 307.0 266 62.8
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.1e-79 300.8 199 76.9
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.4e-78 295.8 214 76.2
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 9.3e-76 287.7 232 60.8
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 1.1e-73 280.8 205 63.4
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.8e-71 273.5 202 63.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 3.8e-69 265.8 166 77.7
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 8.7e-66 254.6 164 76.8
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.1e-65 254.2 202 61.4
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.8e-40 169.9 298 40.9
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 2.1e-35 153.7 176 52.3
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 7.5e-33 145.2 180 42.8
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.8e-31 140.6 92 78.3
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 5.9e-30 135.6 121 50.4
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 6.5e-29 132.1 92 75.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 6.5e-29 132.1 122 59.8
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.4e-26 124.4 159 40.9
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.4e-23 114.4 135 43.7
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 8.9e-10 68.6 80 46.2
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 5.4e-07 59.3 75 50.7


User provided reference genes

Program Settings