Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 2.4e-128 462.2 237 100.0
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 2.7e-63 246.1 188 65.4
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 2.7e-63 246.1 188 65.4
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 2.7e-63 246.1 188 65.4
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 5.0e-46 188.7 186 57.0
Sopen06g007660 Solanum pennellii HOM05D008609 ORTHO05D014791 4.9e-41 172.2 108 82.4
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-32 144.4 132 60.6
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 6.2e-28 128.6 165 44.8
Nitab4.5_0000866g0150 Nicotiana tabacum HOM05D003467 ORTHO05D010659 2.9e-25 119.8 110 60.9
SalBow1G2933 Salvia bowleyana HOM05D009000 ORTHO05D010659 4.4e-18 95.9 116 49.1
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.6e-18 95.1 157 42.7
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 1.6e-15 87.4 140 39.3
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 3.5e-15 86.3 130 44.6
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 3.5e-15 86.3 130 44.6
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 4.6e-15 85.9 179 35.2
Sc08g0004800 Simmondsia chinensis HOM05D004291 ORTHO05D005620 1.0e-14 84.7 137 43.1
LjContig00439g0013523 Lotus japonicus HOM05D009000 ORTHO05D010659 1.3e-14 84.3 121 43.0
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 3.9e-14 82.8 122 41.8
unitig_87.g27989 Utricularia gibba HOM05D015862 ORTHO05D010659 1.5e-13 80.9 137 39.4
FAN20G1765 Fragaria x ananassa HOM05D009000 ORTHO05D010659 1.9e-13 80.5 109 41.3
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 2.5e-13 80.1 174 36.2
Lsat_1_v5_gn_5_17721 Lactuca sativa HOM05D009000 ORTHO05D010659 3.3e-13 79.7 156 33.3
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 7.3e-13 78.6 203 32.5
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 1.6e-12 77.4 185 32.4
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 3.6e-12 76.3 156 40.4
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 1.1e-11 74.7 149 35.6
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 1.4e-11 74.3 113 41.6
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 3.1e-11 73.2 170 35.3
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 4.0e-11 72.8 155 36.8
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 2.0e-10 70.5 131 36.6
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.0e-10 70.5 143 35.0
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 2.0e-10 70.5 143 35.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 2.6e-10 70.1 189 31.2
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.6e-10 70.1 143 35.0
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 4.9e-09 65.9 115 37.4
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 6.4e-09 65.5 179 30.7
Manes.09G035001 Manihot esculenta HOM05D015862 ORTHO05D010659 3.2e-08 63.2 105 38.1
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 5.4e-08 62.4 142 35.9
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 2.1e-07 60.5 109 35.8
VMungo1309G3000 Vigna mungo HOM05D009000 ORTHO05D010659 1.7e-06 57.4 123 35.0


User provided reference genes

Program Settings