Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 8.4e-53 210.3 124 100.0
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.9e-30 134.4 85 76.5
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.5e-29 131.0 121 62.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-27 124.8 121 63.6
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 5.2e-26 121.3 120 64.2
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.8e-26 120.6 121 63.6
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.2e-24 115.9 130 48.5
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-24 115.5 126 54.0
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-23 113.2 121 56.2
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 7.0e-23 110.9 121 62.0
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-22 110.2 127 58.3
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-21 105.9 84 63.1
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.5e-21 104.0 126 58.7
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-20 103.6 99 57.6
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-19 100.1 114 64.0
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-19 100.1 102 55.9
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-19 99.4 116 62.1
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-19 99.4 108 50.9
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-18 97.1 115 53.0
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-18 96.3 108 50.0
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-18 95.9 71 63.4
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 3.0e-18 95.5 74 62.2
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 5.2e-18 94.7 117 48.7
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.2e-18 94.7 115 48.7
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-18 94.7 108 62.0
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 6.8e-18 94.4 117 47.0
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.8e-18 94.0 73 65.8
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-17 93.6 69 68.1
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-17 93.6 74 59.5
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-17 92.8 98 49.0
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.4e-17 92.0 119 52.9
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 3.4e-17 92.0 73 57.5
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.4e-17 91.7 74 66.2
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.7e-17 91.3 120 43.3
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.5e-17 90.9 73 61.6
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 1.7e-16 89.7 114 44.7
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-16 89.4 69 62.3
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 3.7e-16 88.6 114 53.5
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-16 88.6 60 75.0
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-16 88.6 70 60.0
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.8e-16 88.2 67 59.7
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 4.1e-15 85.1 101 47.5
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.0e-15 84.3 66 53.0
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-14 83.2 63 66.7
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.7e-14 82.4 55 69.1
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-14 82.4 104 60.6
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.5e-14 82.0 63 63.5
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-14 82.0 63 63.5
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.7e-13 79.7 57 68.4
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-13 79.7 111 51.4
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-12 76.3 62 50.0
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-12 76.3 64 48.4
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-12 75.9 67 47.8
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-12 75.9 64 46.9
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-12 74.7 66 48.5
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-11 73.6 55 63.6
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-11 73.6 80 41.2
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-11 73.2 65 49.2
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-11 72.8 64 46.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-11 72.4 68 44.1
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.6e-11 72.0 83 39.8
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-11 72.0 62 45.2
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 8.0e-11 70.9 37 89.2
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-10 69.7 64 48.4
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-10 69.7 61 47.5
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.3e-10 69.3 54 55.6
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.0e-10 68.9 64 48.4
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.2e-10 68.2 54 51.9
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 5.2e-10 68.2 54 51.9
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.8e-10 67.4 67 44.8
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 8.8e-10 67.4 58 48.3
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-09 67.0 58 46.6
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-09 66.2 66 43.9
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.9e-08 61.6 97 38.1
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 4.9e-08 61.6 61 45.9
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.3e-08 61.2 85 32.9
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.3e-08 61.2 50 48.0
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.4e-07 59.3 78 34.6
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-07 58.5 90 47.8
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 5.4e-07 58.2 85 37.6
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 9.2e-07 57.4 85 36.5
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 9.2e-07 57.4 82 39.0
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.2e-07 57.4 74 36.5
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-06 57.0 69 40.6
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 1.2e-06 57.0 69 40.6
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-06 56.6 82 36.6
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-06 56.6 85 36.5
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 4.5e-06 55.1 65 40.0
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 4.5e-06 55.1 68 39.7
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 4.5e-06 55.1 85 35.3
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 4.5e-06 55.1 68 39.7
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 4.5e-06 55.1 68 39.7
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 5.9e-06 54.7 85 36.5
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 54.7 81 35.8
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 54.3 68 39.7
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 54.3 68 39.7
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 7.7e-06 54.3 56 44.6


User provided reference genes

Program Settings