Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g016070 Solanum pennellii HOM05D008774 ORTHO05D010951 7.9e-47 190.7 141 100.0
Sopen08g015710 Solanum pennellii HOM05D008774 ORTHO05D010951 1.1e-37 160.2 150 79.3
Sopen04g023960 Solanum pennellii HOM05D008774 ORTHO05D010951 1.8e-35 152.9 169 74.0
Sopen11g012500 Solanum pennellii HOM05D000014 ORTHO05D000016 1.5e-34 149.8 169 69.2
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-30 136.0 107 78.5
Sopen11g025520 Solanum pennellii HOM05D008774 ORTHO05D010951 2.2e-20 102.8 104 91.3
Solyc05g044540.3 Solanum lycopersicum HOM05D008774 ORTHO05D010951 3.7e-20 102.1 104 86.5
Sopen12g016410 Solanum pennellii HOM05D008774 ORTHO05D010951 1.1e-19 100.5 104 82.7
Sopen04g024020 Solanum pennellii HOM05D008774 ORTHO05D010951 6.9e-19 97.8 104 90.4
Solyc04g051155.1 Solanum lycopersicum HOM05D008774 ORTHO05D000277 1.2e-18 97.1 66 89.4
Sopen02g011400 Solanum pennellii HOM05D008774 ORTHO05D010951 2.5e-16 89.4 66 80.3
Solyc02g061825.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 1.2e-10 70.5 33 93.9
Sopen00g014170 Solanum pennellii HOM05D008774 ORTHO05D010951 1.2e-10 70.5 33 93.9
Sopen04g024010 Solanum pennellii HOM05D000034 ORTHO05D000037 1.2e-10 70.5 33 93.9
Sopen12g016400 Solanum pennellii HOM05D000034 ORTHO05D000037 1.2e-10 70.5 33 93.9
Sopen02g014140 Solanum pennellii HOM05D000034 ORTHO05D000037 5.9e-10 68.2 37 81.1
Sopen07g025790 Solanum pennellii HOM05D000034 ORTHO05D000037 5.9e-10 68.2 37 81.1
Sopen09g033840 Solanum pennellii HOM05D000034 ORTHO05D000037 5.9e-10 68.2 37 81.1
PGSC0003DMG400000959 Solanum tuberosum HOM05D008774 ORTHO05D010951 5.9e-10 68.2 52 82.7
CAN.G154.7 Capsicum annuum HOM05D004684 ORTHO05D010951 1.0e-09 67.4 66 57.6
CAN.G571.5 Capsicum annuum HOM05D008774 ORTHO05D010951 3.8e-09 65.5 66 57.6
Solyc09g064273.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 3.8e-09 65.5 33 84.8
Solyc11g028025.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 5.0e-09 65.1 33 84.8
CAN.G97.25 Capsicum annuum HOM05D000034 ORTHO05D000037 3.2e-08 62.4 63 55.6
AUR62038629 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.1e-07 59.7 39 66.7
EL10Ac5g11589 Beta vulgaris HOM05D000034 ORTHO05D000037 4.7e-07 58.5 34 67.6
PSO017G6258 Papaver somniferum HOM05D000034 ORTHO05D000037 6.1e-07 58.2 32 78.1
PSO170G1448 Papaver somniferum HOM05D000034 ORTHO05D000037 6.1e-07 58.2 32 78.1
PSO675G3081 Papaver somniferum HOM05D000034 ORTHO05D000037 6.1e-07 58.2 32 78.1
PSO675G5842 Papaver somniferum HOM05D000034 ORTHO05D000037 6.1e-07 58.2 32 78.1
PSO832G0305 Papaver somniferum HOM05D000034 ORTHO05D000037 6.1e-07 58.2 32 78.1
EL10Ac4g08596 Beta vulgaris HOM05D000034 ORTHO05D000277 8.0e-07 57.8 34 67.6
Ah.03g144060 Amaranthus hybridus HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
EL10Ac3g06458 Beta vulgaris HOM05D000034 ORTHO05D000037 1.0e-06 57.4 31 77.4
EL10Ac9g21126 Beta vulgaris HOM05D000034 ORTHO05D000037 1.0e-06 57.4 34 64.7
AUR62002125 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62004197 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62007332 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62008288 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62010704 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.0e-06 57.4 35 65.7
AUR62014937 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62016298 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62019986 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62021534 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62024405 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62028530 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62029549 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62030228 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62030444 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62030449 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62031342 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62032998 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62035348 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62035350 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62037638 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
AUR62041492 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-06 57.4 35 65.7
EL10Ac4g09071 Beta vulgaris HOM05D000034 ORTHO05D000037 1.4e-06 57.0 34 67.6
EL10Ac9g22401 Beta vulgaris HOM05D000034 ORTHO05D000037 1.4e-06 57.0 32 71.9
PSO063G7234 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-06 57.0 32 78.1
PSO339G4691 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-06 57.0 32 75.0
EL10Ac2g03034 Beta vulgaris HOM05D000034 ORTHO05D000037 1.8e-06 56.6 35 62.9
EL10Ac4g07655 Beta vulgaris HOM05D000034 ORTHO05D000037 1.8e-06 56.6 35 62.9
EL10Ac8g20047 Beta vulgaris HOM05D000034 ORTHO05D000037 1.8e-06 56.6 35 62.9
AUR62040264 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.8e-06 56.6 35 65.7
Hma1.2p1_0890F.1_g233020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 56.6 33 75.8
MD02G1090600 Malus domestica HOM05D000034 ORTHO05D000037 1.8e-06 56.6 34 67.6
MD02G1173300 Malus domestica HOM05D000034 ORTHO05D000037 1.8e-06 56.6 34 67.6
PSO017G1737 Papaver somniferum HOM05D000034 ORTHO05D000037 1.8e-06 56.6 32 75.0
PSO063G2241 Papaver somniferum HOM05D000034 ORTHO05D000037 1.8e-06 56.6 32 75.0
PSO111G0099 Papaver somniferum HOM05D000034 ORTHO05D000037 1.8e-06 56.6 32 75.0
PSO675G2744 Papaver somniferum HOM05D000034 ORTHO05D000037 1.8e-06 56.6 32 75.0
PSO832G4021 Papaver somniferum HOM05D000034 ORTHO05D000037 1.8e-06 56.6 32 75.0
AUR62008330 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-06 56.2 39 64.1
AUR62010683 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-06 56.2 39 64.1
AUR62014908 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-06 56.2 32 71.9
AUR62026394 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-06 56.2 32 71.9
AUR62029884 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-06 56.2 39 64.1
Hma1.2p1_0026F.1_g016610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-06 56.2 33 72.7
Hma1.2p1_1130F.1_g259900 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-06 56.2 33 72.7
Ah.13g068910 Amaranthus hybridus HOM05D000034 ORTHO05D000037 3.0e-06 55.8 35 68.6
EL10Ac2g03584 Beta vulgaris HOM05D000034 ORTHO05D000037 3.0e-06 55.8 34 64.7
EL10Ac3g06861 Beta vulgaris HOM05D000034 ORTHO05D000037 3.0e-06 55.8 34 64.7
EL10Ac9g22472 Beta vulgaris HOM05D000034 ORTHO05D000037 3.0e-06 55.8 34 64.7
CANSAT64G1974 Cannabis sativa HOM05D000034 ORTHO05D000037 3.0e-06 55.8 33 75.8
AUR62007596 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.0e-06 55.8 35 62.9
AUR62015465 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.0e-06 55.8 34 67.6
PSO017G3017 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-06 55.8 32 75.0
PSO170G1893 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-06 55.8 32 75.0
PSO409G0020 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-06 55.8 32 75.0
PSO541G5954 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-06 55.8 32 75.0
EL10Ac2g03169 Beta vulgaris HOM05D000034 ORTHO05D000037 4.0e-06 55.5 34 67.6
EL10Ac7g17645 Beta vulgaris HOM05D000034 ORTHO05D000037 4.0e-06 55.5 34 64.7
PSO425G0004 Papaver somniferum HOM05D000034 ORTHO05D000037 4.0e-06 55.5 32 75.0
Atru.chr6.37 Acer truncatum HOM05D000034 ORTHO05D000037 5.2e-06 55.1 36 66.7
EL10Ac7g17179 Beta vulgaris HOM05D000034 ORTHO05D000037 5.2e-06 55.1 34 64.7
AUR62041761 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.2e-06 55.1 39 64.1
FvH4_2g09411 Fragaria vesca HOM05D000034 ORTHO05D000037 5.2e-06 55.1 34 67.6
PSO541G3035 Papaver somniferum HOM05D000034 ORTHO05D000037 5.2e-06 55.1 30 76.7
PSO832G1347 Papaver somniferum HOM05D000034 ORTHO05D000037 5.2e-06 55.1 32 75.0
Atru.chr13.2053 Acer truncatum HOM05D000034 ORTHO05D000037 6.7e-06 54.7 45 55.6
EL10Ac9g22470 Beta vulgaris HOM05D000034 ORTHO05D000037 6.7e-06 54.7 34 61.8
AUR62028368 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.7e-06 54.7 28 82.1
AUR62030490 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.7e-06 54.7 35 62.9
TPR.G19704 Trifolium pratense HOM05D000034 ORTHO05D000037 6.7e-06 54.7 33 69.7
EL10Ac8g19447 Beta vulgaris HOM05D000034 ORTHO05D000037 8.8e-06 54.3 32 68.8
CANSAT01G3160 Cannabis sativa HOM05D000034 ORTHO05D000037 8.8e-06 54.3 36 66.7
ECA232G1280 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.8e-06 54.3 34 64.7
PSO063G4932 Papaver somniferum HOM05D000034 ORTHO05D000037 8.8e-06 54.3 32 71.9
RcHm_v2.0_Chr1g0331991 Rosa chinensis HOM05D000034 ORTHO05D000037 8.8e-06 54.3 32 68.8


User provided reference genes

Program Settings