Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g015220 Solanum pennellii HOM05D000107 ORTHO05D014265 1.6e-100 369.4 181 100.0
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 3.0e-43 179.1 100 89.0
Sopen07g020900 Solanum pennellii HOM05D000107 ORTHO05D000062 4.0e-43 178.7 114 78.9
Sopen09g017160 Solanum pennellii HOM05D000107 ORTHO05D014265 5.2e-43 178.3 100 89.0
Sopen04g010740 Solanum pennellii HOM05D000107 ORTHO05D000062 2.6e-42 176.0 100 89.0
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 1.7e-41 173.3 96 88.5
Sopen03g027010 Solanum pennellii HOM05D000107 ORTHO05D014265 2.8e-41 172.6 100 88.0
Sopen08g019930 Solanum pennellii HOM05D000107 ORTHO05D000062 4.9e-41 171.8 100 86.0
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-40 170.6 100 85.0
Sopen02g004240 Solanum pennellii HOM05D000107 ORTHO05D000062 1.8e-40 169.9 100 87.0
Sopen04g021200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-39 166.8 100 84.0
Sopen07g006310 Solanum pennellii HOM05D000107 ORTHO05D014265 5.9e-39 164.9 100 81.0
Sopen11g019250 Solanum pennellii HOM05D000107 ORTHO05D014265 8.6e-38 161.0 199 46.2
PGSC0003DMG400042404 Solanum tuberosum HOM05D000107 ORTHO05D014265 7.5e-34 147.9 98 77.6
Solyc10g050065.1 Solanum lycopersicum HOM05D000107 ORTHO05D014265 8.3e-33 144.4 90 81.1
Sopen06g014270 Solanum pennellii HOM05D000107 ORTHO05D014265 2.0e-31 139.8 85 81.2
Sopen10g011670 Solanum pennellii HOM05D000107 ORTHO05D014265 1.2e-26 124.0 127 54.3
PGSC0003DMG400043689 Solanum tuberosum HOM05D000107 ORTHO05D014265 2.2e-25 119.8 86 68.6
Sopen09g017580 Solanum pennellii HOM05D000107 ORTHO05D014265 3.3e-21 105.9 89 59.6
Solyc05g150139.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.6e-18 96.3 62 82.3
PGSC0003DMG400043540 Solanum tuberosum HOM05D000107 ORTHO05D014265 4.1e-16 89.0 71 63.4
PGSC0003DMG400034488 Solanum tuberosum HOM05D008583 ORTHO05D014265 7.8e-15 84.7 71 57.7
Sopen05g023540 Solanum pennellii HOM05D000107 ORTHO05D000062 2.1e-12 76.6 41 80.5
Sopen06g007570 Solanum pennellii HOM05D000107 ORTHO05D000062 2.1e-12 76.6 41 80.5
Sopen12g008090 Solanum pennellii HOM05D000107 ORTHO05D000385 2.0e-10 70.1 42 73.8
Sopen08g007140 Solanum pennellii HOM05D000107 ORTHO05D000570 2.2e-09 66.6 73 52.1
ECA248G0231 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.2e-08 62.8 42 61.9
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 3.2e-08 62.8 74 43.2
PGSC0003DMG400043749 Solanum tuberosum HOM05D000107 ORTHO05D014265 3.2e-08 62.8 135 34.8
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 1.6e-07 60.5 41 61.0
AUR62027664 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-07 60.1 40 67.5
AUR62043742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-07 59.7 42 61.9
Ca_04526_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.6e-07 58.9 40 60.0
Sopen09g016800 Solanum pennellii HOM05D000107 ORTHO05D000062 4.6e-07 58.9 69 50.7
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 6.0e-07 58.5 41 58.5
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 6.0e-07 58.5 41 58.5
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 6.0e-07 58.5 41 58.5
Sopen09g017300 Solanum pennellii HOM05D000107 ORTHO05D000062 6.0e-07 58.5 272 24.6
Ah.14g078910 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.0e-06 57.8 40 62.5
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 1.0e-06 57.8 45 55.6
TPR.G18679 Trifolium pratense HOM05D000107 ORTHO05D000062 1.0e-06 57.8 34 67.6
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 1.3e-06 57.4 37 62.2
Sopen07g011270 Solanum pennellii HOM05D000107 ORTHO05D000385 1.3e-06 57.4 41 58.5
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-06 57.0 40 60.0
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-06 57.0 40 60.0
ECA236G1799 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-06 57.0 40 60.0
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 1.7e-06 57.0 41 58.5
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.3e-06 56.6 75 37.3
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 3.0e-06 56.2 37 62.2
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.9e-06 55.8 40 60.0
Rhsim09G0057000 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.9e-06 55.8 40 60.0
Sopen08g007430 Solanum pennellii HOM05D000107 ORTHO05D000062 3.9e-06 55.8 41 56.1
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 3.9e-06 55.8 40 57.5
Solyc10g049415.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.1e-06 55.5 49 53.1
Ah.01g011060 Amaranthus hybridus HOM05D000107 ORTHO05D000062 6.6e-06 55.1 40 57.5
Ah.06g185380 Amaranthus hybridus HOM05D000107 ORTHO05D000062 6.6e-06 55.1 40 57.5
AUR62034742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.6e-06 55.1 38 60.5
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.7e-06 54.7 37 62.2
Sopen02g004720 Solanum pennellii HOM05D000107 ORTHO05D000062 8.7e-06 54.7 41 56.1
Sopen03g018020 Solanum pennellii HOM05D000107 ORTHO05D000062 8.7e-06 54.7 41 51.2
Sopen10g023130 Solanum pennellii HOM05D000107 ORTHO05D000062 8.7e-06 54.7 37 59.5
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 8.7e-06 54.7 37 59.5


User provided reference genes

Program Settings