Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 3.2e-198 694.9 355 100.0
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-93 347.1 459 47.7
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-67 258.5 348 43.1
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 4.5e-59 232.6 168 64.9
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.8e-59 231.9 147 76.9
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-58 230.7 249 51.4
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-58 229.9 147 73.5
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-54 216.1 401 39.2
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-52 211.5 413 36.8
PGSC0003DMG400047082 Solanum tuberosum HOM05D003888 ORTHO05D017120 1.2e-48 198.0 214 57.9
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.3e-45 185.3 167 65.9
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-40 169.5 304 39.5
PGSC0003DMG400020598 Solanum tuberosum HOM05D003888 ORTHO05D017120 4.0e-39 166.4 152 67.8
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-38 164.5 344 34.3
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-37 159.8 276 38.8
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-36 157.9 199 45.7
PGSC0003DMG400038520 Solanum tuberosum HOM05D003888 ORTHO05D017120 7.1e-36 155.6 222 48.2
PGSC0003DMG400042221 Solanum tuberosum HOM05D003888 ORTHO05D017120 1.9e-33 147.5 115 72.2
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 5.6e-33 146.0 105 69.5
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-31 140.2 77 75.3
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-30 137.9 211 40.8
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-30 137.5 208 42.3
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-30 135.2 80 68.8
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-28 129.8 133 47.4
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.2e-28 129.8 207 39.1
Sopen07g010790 Solanum pennellii HOM05D000107 ORTHO05D017120 1.6e-27 127.9 223 42.2
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-26 125.2 121 54.5
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 1.3e-26 124.8 124 46.8
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-25 121.3 68 85.3
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 9.6e-25 118.6 163 38.0
PGSC0003DMG400041597 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.2e-24 115.9 122 60.7
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.8e-23 114.4 162 40.1
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 3.4e-22 110.2 72 69.4
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.4e-21 105.5 148 41.2
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-20 104.8 73 74.0
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-20 104.0 60 70.0
Solyc10g150134.1 Solanum lycopersicum HOM05D003888 ORTHO05D017120 3.2e-20 103.6 95 58.9
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 4.2e-20 103.2 163 35.6
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-20 102.8 48 89.6
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-20 102.8 48 89.6
Sopen07g010800 Solanum pennellii HOM05D003888 ORTHO05D017120 4.6e-19 99.8 127 48.8
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 7.9e-19 99.0 130 40.8
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-19 99.0 170 34.7
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 7.9e-19 99.0 130 41.5
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 3.0e-18 97.1 149 37.6
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 5.1e-18 96.3 167 37.7
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 8.7e-18 95.5 144 39.6
Hund15065 Selenicereus undatus HOM05D009146 ORTHO05D011649 8.7e-18 95.5 106 42.5
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-17 94.7 47 83.0
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.6e-16 91.3 157 35.0
Sopen07g007210 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-16 91.3 78 55.1
Hund10867 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.1e-16 90.9 92 45.7
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 2.8e-16 90.5 149 35.6
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.6e-16 90.1 120 42.5
Nitab4.5_0012868g0030 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.8e-16 89.7 72 56.9
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-15 88.6 83 50.6
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 3.1e-15 87.0 331 28.4
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 5.3e-15 86.3 159 33.3
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.4e-14 83.6 52 63.5
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 7.6e-14 82.4 70 55.7
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 1.3e-13 81.6 147 37.4
Manes.12G086248 Manihot esculenta HOM05D009290 ORTHO05D009597 1.3e-13 81.6 159 32.7
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-13 81.3 196 31.1
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-13 81.3 130 36.2
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 2.9e-13 80.5 99 41.4
PGSC0003DMG400003610 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-13 79.7 87 59.8
Sopen02g008430 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-12 78.6 104 54.8
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-12 77.8 122 36.9
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 2.4e-12 77.4 92 43.5
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 2.4e-12 77.4 111 38.7
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 2.4e-12 77.4 37 86.5
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-12 77.0 124 41.1
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 7.1e-12 75.9 73 49.3
Nitab4.5_0000037g0270 Nicotiana tabacum HOM05D008541 ORTHO05D010458 7.1e-12 75.9 185 34.6
Nitab4.5_0005770g0030 Nicotiana tabacum HOM05D009290 ORTHO05D009597 7.1e-12 75.9 128 33.6
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 9.3e-12 75.5 130 35.4
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-11 74.7 88 43.2
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 2.1e-11 74.3 157 31.8
EL10Ac3g06642 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-11 74.3 73 47.9
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 2.7e-11 73.9 199 30.7
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.7e-11 73.9 86 46.5
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 3.5e-11 73.6 134 32.8
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.0e-11 72.8 112 35.7
Solyc10g052847.1 Solanum lycopersicum HOM05D003888 ORTHO05D017120 6.0e-11 72.8 117 41.9
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-11 72.8 117 38.5
AUR62037959 Chenopodium quinoa HOM05D000107 ORTHO05D009597 7.9e-11 72.4 128 33.6
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 7.9e-11 72.4 105 36.2
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-10 71.6 92 40.2
Manes.16G080850 Manihot esculenta HOM05D009290 ORTHO05D009597 1.3e-10 71.6 126 34.1
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.3e-10 71.6 165 32.7
Sc02g0005550 Simmondsia chinensis HOM05D003888 ORTHO05D011649 1.8e-10 71.2 108 36.1
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.0e-10 70.5 101 36.6
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 3.9e-10 70.1 101 38.6
Nitab4.5_0000970g0140 Nicotiana tabacum HOM05D008541 ORTHO05D010458 3.9e-10 70.1 188 33.5
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 5.1e-10 69.7 230 29.6
AUR62039309 Chenopodium quinoa HOM05D008455 ORTHO05D009597 8.7e-10 68.9 128 32.0
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 1.9e-09 67.8 57 54.4
AUR62037081 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.5e-09 67.4 128 32.8
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-09 67.0 60 51.7
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-08 64.7 37 70.3
Hund15433 Selenicereus undatus HOM05D008455 ORTHO05D009597 2.1e-08 64.3 118 33.9
Sopen04g001780 Solanum pennellii HOM05D003888 ORTHO05D007163 2.8e-08 63.9 148 35.8
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 3.7e-08 63.5 203 30.5
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.7e-08 63.5 126 36.5
Manes.07G063157 Manihot esculenta HOM05D009290 ORTHO05D009597 4.8e-08 63.2 102 34.3
Manes.08G084511 Manihot esculenta HOM05D009290 ORTHO05D009597 4.8e-08 63.2 102 34.3
Hund08561 Selenicereus undatus HOM05D008455 ORTHO05D009597 8.1e-08 62.4 139 32.4
Nitab4.5_0014285g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.8e-07 61.2 128 27.3
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.0e-07 60.1 32 75.0
Manes.06G160267 Manihot esculenta HOM05D009290 ORTHO05D009597 9.0e-07 58.9 102 32.4
EL10Ac2g03389 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-06 58.5 53 50.9
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 1.2e-06 58.5 142 29.6
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-06 58.2 52 50.0
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-06 57.8 92 40.2
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 3.4e-06 57.0 135 31.1
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.5e-06 56.6 105 35.2
Solyc10g052718.1 Solanum lycopersicum HOM05D003888 ORTHO05D017120 4.5e-06 56.6 38 71.1
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.8e-06 56.2 125 31.2
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 5.8e-06 56.2 133 24.1
Solyc07g022815.1 Solanum lycopersicum HOM05D003888 ORTHO05D391502 7.6e-06 55.8 31 83.9
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 7.6e-06 55.8 133 24.1


User provided reference genes

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