Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 6.3e-154 547.4 269 100.0
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 1.2e-147 526.6 269 97.0
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 7.8e-136 487.3 269 89.6
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 4.1e-113 411.8 270 77.0
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 2.7e-112 409.1 269 75.8
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 5.1e-95 351.7 271 68.3
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 4.8e-53 212.2 251 50.6
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 1.2e-51 207.6 277 46.2
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 1.1e-49 201.1 262 45.0
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 3.2e-49 199.5 280 42.9
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 2.7e-48 196.4 290 43.4
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 3.6e-48 196.1 252 45.2
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 6.1e-48 195.3 275 44.4
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 2.8e-45 186.4 326 40.5
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 8.2e-45 184.9 286 42.7
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 5.3e-44 182.2 284 37.3
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 1.2e-43 181.0 258 43.8
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 3.2e-41 172.9 237 41.8
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 4.2e-41 172.6 240 41.7
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 1.0e-39 167.9 238 41.6
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 6.8e-39 165.2 292 38.0
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 8.8e-39 164.9 229 44.1
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 3.4e-38 162.9 242 46.3
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 5.7e-38 162.2 227 43.2
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.3e-37 161.0 224 43.3
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 1.7e-37 160.6 319 36.7
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 2.8e-37 159.8 224 43.8
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 1.8e-36 157.1 237 44.3
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 7.0e-36 155.2 285 40.7
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 5.0e-34 149.1 259 39.0
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 4.2e-33 146.0 256 41.4
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 3.4e-30 136.3 225 40.0
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 6.3e-29 132.1 223 39.9
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 3.5e-27 126.3 225 38.2
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.1e-25 121.3 136 45.6
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 2.3e-23 113.6 204 38.2
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 9.8e-22 108.2 251 31.1
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 8.3e-21 105.1 248 31.0
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 5.4e-20 102.4 107 53.3
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 3.5e-19 99.8 130 47.7
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 4.4e-14 82.8 251 30.3
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 4.4e-14 82.8 82 48.8
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 3.2e-12 76.6 121 40.5
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 2.0e-11 73.9 246 27.2
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 6.0e-11 72.4 215 29.3
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 1.1e-09 68.2 234 26.5
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 1.5e-09 67.8 128 40.6
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 2.5e-09 67.0 239 26.4
Migut.C01342 Erythranthe guttata HOM05D008742 ORTHO05D010377 2.5e-09 67.0 107 46.7
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 2.3e-07 60.5 216 26.4
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 4.0e-07 59.7 279 24.4
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 1.2e-06 58.2 42 59.5
CARHR260950 Cardamine hirsuta HOM05D012304 ORTHO05D010377 3.4e-06 56.6 110 31.8
BcaB05g23938 Brassica carinata HOM05D012304 ORTHO05D010377 7.5e-06 55.5 263 24.0
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 7.5e-06 55.5 281 22.8


User provided reference genes

Program Settings