Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g012770 Solanum pennellii HOM05D056827 ORTHO05D026186 1.4e-79 299.7 160 100.0
PGSC0003DMG400005431 Solanum tuberosum HOM05D017937 ORTHO05D026186 1.4e-12 77.0 98 50.0
Solyc05g026510.4 Solanum lycopersicum HOM05D004682 ORTHO05D006197 8.7e-10 67.8 107 45.8
Sopen05g022990 Solanum pennellii HOM05D004682 ORTHO05D006197 8.7e-10 67.8 107 45.8
PGSC0003DMG400019559 Solanum tuberosum HOM05D004682 ORTHO05D006197 8.7e-10 67.8 44 81.8
PGSC0003DMG401015901 Solanum tuberosum HOM05D004682 ORTHO05D006197 1.1e-09 67.4 107 45.8
Sopen05g017680 Solanum pennellii HOM05D056827 ORTHO05D026186 2.5e-09 66.2 81 51.9
PGSC0003DMG400017058 Solanum tuberosum HOM05D004682 ORTHO05D026186 4.8e-08 62.0 59 57.6
CAN.G13.21 Capsicum annuum HOM05D004682 ORTHO05D006197 1.5e-06 57.0 49 67.3
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 2.6e-06 56.2 107 41.1
Nitab4.5_0000282g0030 Nicotiana tabacum HOM05D004682 ORTHO05D006197 2.6e-06 56.2 107 41.1
Duzib138G0788 Durio zibethinus HOM05D004682 ORTHO05D006197 3.4e-06 55.8 49 61.2
Gohir.A11G118700 Gossypium hirsutum HOM05D004682 ORTHO05D006197 3.4e-06 55.8 49 61.2
Gohir.D11G123600 Gossypium hirsutum HOM05D004682 ORTHO05D006197 3.4e-06 55.8 49 61.2
Manes.01G212500 Manihot esculenta HOM05D004682 ORTHO05D006197 3.4e-06 55.8 49 57.1
Thecc.01G288600 Theobroma cacao HOM05D004682 ORTHO05D006197 3.4e-06 55.8 49 61.2
COL.COLO4_08044 Corchorus olitorius HOM05D004682 ORTHO05D006197 4.5e-06 55.5 49 61.2
TWI59G0906 Tripterygium wilfordii HOM05D004682 ORTHO05D006197 4.5e-06 55.5 49 59.2
Lj2A1184G69 Lonicera japonica HOM05D004682 ORTHO05D006197 5.9e-06 55.1 48 60.4
Atru.chr5.1294 Acer truncatum HOM05D004682 ORTHO05D006197 7.7e-06 54.7 49 59.2
CANSAT25G1381 Cannabis sativa HOM05D004682 ORTHO05D006197 1.0e-05 54.3 112 36.6


User provided reference genes

Program Settings