Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g011500 Solanum pennellii HOM05D000017 ORTHO05D018899 8.0e-104 380.6 210 100.0
Sopen03g017650 Solanum pennellii HOM05D000017 ORTHO05D000013 3.1e-55 219.2 215 59.1
Sopen05g030950 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-50 204.1 215 63.3
Sopen11g009200 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-50 202.2 215 62.8
Solyc05g150147.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.7e-43 179.5 200 62.0
Sopen04g018010 Solanum pennellii HOM05D000017 ORTHO05D001349 3.5e-43 179.1 204 60.8
Sopen09g008710 Solanum pennellii HOM05D000006 ORTHO05D000001 2.8e-40 169.5 210 57.6
Sopen10g011920 Solanum pennellii HOM05D000017 ORTHO05D001349 6.5e-21 105.1 147 48.3
Sopen12g009320 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-17 92.0 147 55.1
Sopen12g023710 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-14 84.0 194 34.5
Solyc12g042680.1 Solanum lycopersicum HOM05D000017 ORTHO05D000002 2.6e-14 83.2 88 71.6
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-14 82.8 234 35.9
Sopen03g028620 Solanum pennellii HOM05D001851 ORTHO05D013101 3.4e-14 82.8 234 35.9
Peaxi162Scf00081g01815 Petunia axillaris HOM05D000017 ORTHO05D009364 4.5e-14 82.4 253 37.9
Nitab4.5_0002569g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-13 80.9 68 58.8
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.8e-13 79.3 187 34.8
Nitab4.5_0006080g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.1e-12 77.8 77 57.1
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 3.2e-12 76.3 272 31.6
Sopen01g006290 Solanum pennellii HOM05D000017 ORTHO05D013101 4.2e-12 75.9 239 33.9
Nitab4.5_0000444g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.5e-12 75.5 199 33.7
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-12 75.1 90 48.9
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-12 75.1 90 48.9
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 7.2e-12 75.1 90 48.9
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-12 75.1 90 48.9
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-12 75.1 272 31.6
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-12 75.1 272 31.6
Sopen04g024810 Solanum pennellii HOM05D000017 ORTHO05D000002 1.6e-11 73.9 145 47.6
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-11 73.9 273 32.2
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-10 71.2 212 37.3
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 1.4e-10 70.9 131 39.7
Solyc05g047645.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 3.9e-10 69.3 68 58.8
CAN.G770.1 Capsicum annuum HOM05D000017 ORTHO05D018899 5.1e-10 68.9 63 50.8
Sopen12g007590 Solanum pennellii HOM05D000017 ORTHO05D001349 5.1e-10 68.9 89 47.2
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 1.5e-09 67.4 87 40.2
Nitab4.5_0005340g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.6e-09 66.6 178 30.9
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-09 66.6 83 47.0
PGSC0003DMG400013047 Solanum tuberosum HOM05D000017 ORTHO05D000013 2.6e-09 66.6 83 48.2
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 3.3e-09 66.2 83 45.8
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 3.3e-09 66.2 83 45.8
Nitab4.5_0001839g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 5.7e-09 65.5 56 58.9
Nitab4.5_0007142g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.7e-09 65.5 61 55.7
Nitab4.5_0001330g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 9.7e-09 64.7 188 30.9
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-08 64.3 83 44.6
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-08 64.3 83 45.8
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 1.7e-08 63.9 83 44.6
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 2.2e-08 63.5 83 45.8
Nitab4.5_0000712g0110 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.8e-08 63.2 62 51.6
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.8e-08 63.2 83 44.6
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-08 63.2 83 44.6
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-08 63.2 83 44.6
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-08 62.4 65 49.2
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 1.4e-07 60.8 199 35.7
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.4e-07 60.1 76 40.8
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.4e-07 60.1 90 42.2
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 3.1e-07 59.7 83 44.6
PGSC0003DMG400001165 Solanum tuberosum HOM05D000017 ORTHO05D000013 3.1e-07 59.7 80 42.5
CAN.G62.11 Capsicum annuum HOM05D021591 ORTHO05D018899 4.1e-07 59.3 68 44.1
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 7.0e-07 58.5 75 44.0
Nitab4.5_0002573g0020 Nicotiana tabacum HOM05D000017 ORTHO05D006664 2.6e-06 56.6 65 50.8
PGSC0003DMG400016298 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.5e-06 56.2 85 40.0
THA.LOC104808850 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.5e-06 56.2 80 37.5
Nitab4.5_0000530g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.9e-06 55.5 83 41.0
Nitab4.5_0003328g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.9e-06 55.5 111 40.5


User provided reference genes

Program Settings