Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g011380 Solanum pennellii HOM05D002833 ORTHO05D003210 7.8e-123 443.7 214 100.0
Sopen11g009220 Solanum pennellii HOM05D002833 ORTHO05D003210 1.4e-92 343.2 183 92.9
Sopen11g011440 Solanum pennellii HOM05D000004 ORTHO05D000001 1.6e-88 329.7 183 89.6
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-36 156.8 255 40.4
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-36 156.8 255 40.4
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.6e-36 155.2 256 39.8
Sopen01g011230 Solanum pennellii HOM05D000047 ORTHO05D003210 1.6e-35 153.7 183 50.8
Sopen05g010840 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-31 139.4 189 43.9
Sopen04g023680 Solanum pennellii HOM05D000002 ORTHO05D019253 1.0e-29 134.4 131 55.7
Sopen10g012450 Solanum pennellii HOM05D000006 ORTHO05D000001 5.6e-28 128.6 99 57.6
CANSAT78G2186 Cannabis sativa HOM05D002833 ORTHO05D003210 1.1e-23 114.4 123 52.0
VMungo0464G1997 Vigna mungo HOM05D002833 ORTHO05D003210 1.9e-23 113.6 86 61.6
Sopen09g026360 Solanum pennellii HOM05D002833 ORTHO05D019253 4.1e-23 112.5 119 54.6
ECA240G2389 Erigeron canadensis HOM05D000002 ORTHO05D003210 5.4e-23 112.1 240 32.1
TPR.G40622 Trifolium pratense HOM05D002833 ORTHO05D003210 2.3e-21 106.7 97 53.6
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 3.9e-21 105.9 259 31.3
ECA236G5050 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-21 104.8 198 34.3
ECA246G0311 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.1e-19 100.1 257 31.5
ECA236G0516 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.8e-19 99.8 104 47.1
AUR62007555 Chenopodium quinoa HOM05D002833 ORTHO05D003210 6.2e-19 98.6 94 46.8
HanXRQChr17g0552671 Helianthus annuus HOM05D002833 ORTHO05D003210 6.2e-19 98.6 106 46.2
HanXRQChr03g0061761 Helianthus annuus HOM05D002833 ORTHO05D003210 4.0e-18 95.9 92 46.7
HanXRQChr03g0093111 Helianthus annuus HOM05D000002 ORTHO05D000001 5.2e-18 95.5 123 39.0
HanXRQChr08g0213721 Helianthus annuus HOM05D000061 ORTHO05D003210 6.8e-18 95.1 92 48.9
ECA238G4367 Erigeron canadensis HOM05D002833 ORTHO05D003210 8.9e-18 94.7 92 53.3
HanXRQChr17g0542971 Helianthus annuus HOM05D002833 ORTHO05D003210 1.5e-17 94.0 99 43.4
HanXRQChr13g0410331 Helianthus annuus HOM05D000002 ORTHO05D000001 4.4e-17 92.4 257 29.6
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 5.8e-17 92.0 95 43.2
ECA247G0228 Erigeron canadensis HOM05D002833 ORTHO05D003210 7.6e-17 91.7 118 42.4
Sopen06g002190 Solanum pennellii HOM05D002833 ORTHO05D019253 9.9e-17 91.3 172 39.5
AUR62026133 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.3e-16 90.9 90 48.9
Medtr8g074100 Medicago truncatula HOM05D002833 ORTHO05D003210 1.3e-16 90.9 71 59.2
HanXRQChr02g0054271 Helianthus annuus HOM05D002833 ORTHO05D003210 1.7e-16 90.5 87 47.1
HanXRQChr07g0189441 Helianthus annuus HOM05D002833 ORTHO05D003210 2.2e-16 90.1 244 29.9
ECA233G3435 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.9e-16 89.7 96 43.8
ECA248G3833 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.9e-16 89.7 211 32.2
ECA236G1804 Erigeron canadensis HOM05D000031 ORTHO05D000001 3.8e-16 89.4 85 50.6
ECA238G2751 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-16 88.6 95 46.3
AUR62033479 Chenopodium quinoa HOM05D002833 ORTHO05D003210 8.4e-16 88.2 91 49.5
EL10Ac6g14483 Beta vulgaris HOM05D002833 ORTHO05D003210 1.1e-15 87.8 122 37.7
ECA238G0718 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.9e-15 87.0 125 38.4
Solyc11g016945.1 Solanum lycopersicum HOM05D002833 ORTHO05D003210 3.2e-15 86.3 172 31.4
AUR62024857 Chenopodium quinoa HOM05D002833 ORTHO05D003210 4.1e-15 85.9 233 30.9
HanXRQChr10g0295801 Helianthus annuus HOM05D002833 ORTHO05D003210 5.4e-15 85.5 93 43.0
Lalb_Chr09g0335481 Lupinus albus HOM05D002833 ORTHO05D003210 5.4e-15 85.5 143 39.2
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 5.4e-15 85.5 172 31.4
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 5.4e-15 85.5 172 31.4
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-15 85.5 172 31.4
AUR62024333 Chenopodium quinoa HOM05D002833 ORTHO05D003210 9.2e-15 84.7 85 49.4
ECA233G0427 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-14 84.0 85 47.1
ECA233G4286 Erigeron canadensis HOM05D000002 ORTHO05D003210 2.1e-14 83.6 117 37.6
ECA246G0664 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-14 82.4 98 42.9
PSO675G9166 Papaver somniferum HOM05D002833 ORTHO05D003210 4.6e-14 82.4 239 28.9
Sopen05g015750 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-14 82.4 104 49.0
AUR62020789 Chenopodium quinoa HOM05D002833 ORTHO05D003210 6.0e-14 82.0 76 50.0
AUR62023882 Chenopodium quinoa HOM05D002833 ORTHO05D003210 7.8e-14 81.6 85 41.2
AUR62027485 Chenopodium quinoa HOM05D002833 ORTHO05D003210 7.8e-14 81.6 88 45.5
ECA236G0409 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-13 81.3 93 40.9
Ah.14g080650 Amaranthus hybridus HOM05D002833 ORTHO05D003210 1.3e-13 80.9 91 39.6
AUR62021616 Chenopodium quinoa HOM05D021338 ORTHO05D003210 1.3e-13 80.9 99 44.4
ECA247G0705 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-13 80.1 94 39.4
HanXRQChr06g0173581 Helianthus annuus HOM05D002833 ORTHO05D003210 2.3e-13 80.1 85 43.5
Ah.11g044560 Amaranthus hybridus HOM05D002833 ORTHO05D003210 5.1e-13 79.0 107 38.3
AUR62016350 Chenopodium quinoa HOM05D002833 ORTHO05D003210 6.6e-13 78.6 85 45.9
ECA246G4759 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-13 78.6 90 37.8
ECA234G3324 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.5e-12 77.4 93 40.9
ECA233G2682 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-12 77.0 89 40.4
ECA240G3959 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-12 77.0 91 38.5
PSO541G3964 Papaver somniferum HOM05D002833 ORTHO05D003210 1.9e-12 77.0 138 32.6
ECA233G3460 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-12 75.9 107 39.3
ECA248G2462 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-12 75.9 232 26.3
ECA234G0889 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-12 75.5 182 30.8
Sopen02g005450 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-12 75.1 119 40.3
Sopen11g021960 Solanum pennellii HOM05D002833 ORTHO05D003210 7.3e-12 75.1 94 42.6
PSO063G6615 Papaver somniferum HOM05D002833 ORTHO05D003210 9.6e-12 74.7 233 28.8
PSO349G0083 Papaver somniferum HOM05D002833 ORTHO05D003210 1.6e-11 73.9 159 28.9
AUR62042214 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.1e-11 73.6 82 45.1
PSO170G0066 Papaver somniferum HOM05D002833 ORTHO05D003210 2.1e-11 73.6 92 37.0
HanXRQChr03g0072991 Helianthus annuus HOM05D002833 ORTHO05D003210 2.8e-11 73.2 176 28.4
PSO104G0123 Papaver somniferum HOM05D002833 ORTHO05D003210 3.6e-11 72.8 169 28.4
PSO135G1061 Papaver somniferum HOM05D002833 ORTHO05D003210 3.6e-11 72.8 87 39.1
PSO541G0683 Papaver somniferum HOM05D002833 ORTHO05D003210 4.7e-11 72.4 91 38.5
PSO782G0726 Papaver somniferum HOM05D002833 ORTHO05D003210 4.7e-11 72.4 91 38.5
PSO170G0231 Papaver somniferum HOM05D002833 ORTHO05D003210 6.2e-11 72.0 92 35.9
PSO170G2323 Papaver somniferum HOM05D002833 ORTHO05D003210 6.2e-11 72.0 94 36.2
PSO724G0595 Papaver somniferum HOM05D002833 ORTHO05D003210 6.2e-11 72.0 94 36.2
PSO832G4022 Papaver somniferum HOM05D002833 ORTHO05D003210 6.2e-11 72.0 94 36.2
HanXRQChr01g0001201 Helianthus annuus HOM05D002833 ORTHO05D003210 1.4e-10 70.9 243 26.3
PSO063G2619 Papaver somniferum HOM05D002833 ORTHO05D003210 1.8e-10 70.5 91 37.4
ECA232G1032 Erigeron canadensis HOM05D000356 ORTHO05D000265 2.4e-10 70.1 100 35.0
ECA238G2538 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-10 70.1 92 38.0
PSO017G0356 Papaver somniferum HOM05D002833 ORTHO05D003210 4.0e-10 69.3 159 28.3
PSO210G7122 Papaver somniferum HOM05D002833 ORTHO05D003210 4.0e-10 69.3 219 25.1
PSO541G3398 Papaver somniferum HOM05D002833 ORTHO05D003210 4.0e-10 69.3 147 29.9
PSO700G0004 Papaver somniferum HOM05D002833 ORTHO05D003210 5.2e-10 68.9 91 34.1
PSO170G5705 Papaver somniferum HOM05D002833 ORTHO05D003210 6.9e-10 68.6 94 34.0
PSO384G1482 Papaver somniferum HOM05D002833 ORTHO05D003210 6.9e-10 68.6 94 34.0
PSO384G3504 Papaver somniferum HOM05D002833 ORTHO05D003210 6.9e-10 68.6 94 34.0
PSO675G0475 Papaver somniferum HOM05D002833 ORTHO05D003210 8.9e-10 68.2 82 36.6
PSO732G0723 Papaver somniferum HOM05D002833 ORTHO05D003210 8.9e-10 68.2 91 37.4
THA.LOC109116961 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 8.9e-10 68.2 173 28.9
PSO729G0013 Papaver somniferum HOM05D002833 ORTHO05D003210 1.2e-09 67.8 228 26.3
PSO732G0384 Papaver somniferum HOM05D002833 ORTHO05D003210 1.2e-09 67.8 94 34.0
ECA233G4356 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.5e-09 67.4 81 39.5
PSO170G4012 Papaver somniferum HOM05D002833 ORTHO05D003210 2.0e-09 67.0 167 26.3
PSO210G4142 Papaver somniferum HOM05D002833 ORTHO05D003210 2.0e-09 67.0 150 28.0
Medtr8g442260 Medicago truncatula HOM05D002833 ORTHO05D003210 2.6e-09 66.6 61 52.5
PSO063G4800 Papaver somniferum HOM05D002833 ORTHO05D003210 2.6e-09 66.6 94 34.0
THA.LOC109116033 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 2.6e-09 66.6 178 27.0
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 3.4e-09 66.2 89 38.2
Medtr3g464020 Medicago truncatula HOM05D002833 ORTHO05D003210 3.4e-09 66.2 88 37.5
AT5G48050 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 4.4e-09 65.9 90 38.9
AUR62039580 Chenopodium quinoa HOM05D002833 ORTHO05D003210 4.4e-09 65.9 196 30.1
PSO170G1611 Papaver somniferum HOM05D002833 ORTHO05D003210 4.4e-09 65.9 91 35.2
PSO675G8443 Papaver somniferum HOM05D002833 ORTHO05D003210 4.4e-09 65.9 91 36.3
Sp6g08170 Schrenkiella parvula HOM05D002833 ORTHO05D003210 4.4e-09 65.9 97 37.1
AUR62027634 Chenopodium quinoa HOM05D002833 ORTHO05D003210 5.8e-09 65.5 95 38.9
PSO017G4031 Papaver somniferum HOM05D002833 ORTHO05D003210 5.8e-09 65.5 153 26.1
PSO729G0150 Papaver somniferum HOM05D002833 ORTHO05D003210 5.8e-09 65.5 193 29.5
PSO675G8345 Papaver somniferum HOM05D002833 ORTHO05D003210 7.6e-09 65.1 229 24.9
PSO782G2949 Papaver somniferum HOM05D002833 ORTHO05D003210 9.9e-09 64.7 94 33.0
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-08 64.3 97 34.0
ECA246G4627 Erigeron canadensis HOM05D000022 ORTHO05D000744 1.3e-08 64.3 48 60.4
PSO384G1274 Papaver somniferum HOM05D002833 ORTHO05D003210 1.3e-08 64.3 228 25.0
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-08 63.9 178 27.5
PSO063G3721 Papaver somniferum HOM05D002833 ORTHO05D003210 1.7e-08 63.9 180 24.4
PSO423G0090 Papaver somniferum HOM05D002833 ORTHO05D003210 1.7e-08 63.9 228 24.6
PSO210G2412 Papaver somniferum HOM05D002833 ORTHO05D003210 2.2e-08 63.5 94 30.9
PSO837G0004 Papaver somniferum HOM05D002833 ORTHO05D003210 2.2e-08 63.5 94 33.0
PSO675G7338 Papaver somniferum HOM05D002833 ORTHO05D003210 2.9e-08 63.2 171 25.1
Ah.05g172100 Amaranthus hybridus HOM05D002833 ORTHO05D003210 3.8e-08 62.8 72 44.4
ECA246G2299 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-08 62.8 87 35.6
HanXRQChr12g0377931 Helianthus annuus HOM05D000002 ORTHO05D000001 3.8e-08 62.8 95 33.7
PSO384G4886 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-08 62.8 82 32.9
PSO675G4075 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-08 62.8 176 24.4
PSO724G1285 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-08 62.8 148 26.4
PSO339G6159 Papaver somniferum HOM05D002833 ORTHO05D003210 4.9e-08 62.4 148 25.7
PSO541G2692 Papaver somniferum HOM05D002833 ORTHO05D003210 4.9e-08 62.4 209 24.9
ECA234G3301 Erigeron canadensis HOM05D002833 ORTHO05D003210 6.4e-08 62.0 176 27.3
ECA236G4198 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-08 62.0 94 34.0
PSO017G2161 Papaver somniferum HOM05D002833 ORTHO05D003210 6.4e-08 62.0 148 26.4
PSO541G4229 Papaver somniferum HOM05D002833 ORTHO05D003210 6.4e-08 62.0 95 30.5
PSO063G5794 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-07 61.2 67 44.8
PSO601G0001 Papaver somniferum HOM05D002833 ORTHO05D003210 1.4e-07 60.8 82 32.9
PSO782G3831 Papaver somniferum HOM05D002833 ORTHO05D003210 1.4e-07 60.8 180 23.9
HanXRQChr06g0174021 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-07 60.5 182 25.8
PSO675G0904 Papaver somniferum HOM05D002833 ORTHO05D003210 1.9e-07 60.5 219 24.2
AUR62029166 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.4e-07 60.1 93 41.9
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 3.2e-07 59.7 92 33.7
AUR62036099 Chenopodium quinoa HOM05D002833 ORTHO05D003210 4.2e-07 59.3 61 42.6
PSO675G6366 Papaver somniferum HOM05D002833 ORTHO05D003210 5.4e-07 58.9 202 23.8
Nitab4.5_0003319g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 9.3e-07 58.2 87 35.6
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 9.3e-07 58.2 87 36.8
Sp4g03150 Schrenkiella parvula HOM05D002833 ORTHO05D003210 1.6e-06 57.4 80 35.0
BolC5t31076H Brassica oleracea HOM05D002833 ORTHO05D003210 2.1e-06 57.0 107 31.8
ECA238G1436 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.1e-06 57.0 108 32.4
PSO017G2940 Papaver somniferum HOM05D002833 ORTHO05D003210 2.1e-06 57.0 70 37.1
PSO210G5263 Papaver somniferum HOM05D002833 ORTHO05D003210 2.1e-06 57.0 197 22.3
AUR62026603 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.7e-06 56.6 49 49.0
ECA236G0514 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 56.6 64 43.8
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.7e-06 56.6 92 32.6
PSO421G0413 Papaver somniferum HOM05D002833 ORTHO05D003210 2.7e-06 56.6 156 25.0
Solyc02g061920.2 Solanum lycopersicum HOM05D002833 ORTHO05D003210 2.7e-06 56.6 55 41.8
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 3.5e-06 56.2 87 34.5
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.5e-06 56.2 87 34.5
SpUn0139_0010 Schrenkiella parvula HOM05D002833 ORTHO05D003210 3.5e-06 56.2 128 30.5
AL6G51530 Arabidopsis lyrata HOM05D002833 ORTHO05D003210 6.0e-06 55.5 182 26.9
PSO084G0001 Papaver somniferum HOM05D002833 ORTHO05D003210 6.0e-06 55.5 144 27.8
BolC5t31072H Brassica oleracea HOM05D002833 ORTHO05D003210 7.8e-06 55.1 107 30.8
PSO765G0153 Papaver somniferum HOM05D002833 ORTHO05D003210 7.8e-06 55.1 201 24.4


User provided reference genes

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