Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g011320 Solanum pennellii HOM05D008562 ORTHO05D000001 1.5e-81 306.2 161 100.0
Sopen11g011290 Solanum pennellii HOM05D008562 ORTHO05D000001 9.2e-68 260.4 148 94.6
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 1.4e-31 140.2 126 64.3
Sopen11g011410 Solanum pennellii HOM05D008562 ORTHO05D009932 6.7e-18 94.7 84 61.9
Sopen00g003000 Solanum pennellii HOM05D008562 ORTHO05D000001 8.8e-18 94.4 84 61.9
CSS0012492 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-17 90.9 73 63.0
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-17 90.9 73 63.0
CSS0036723 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-17 90.9 73 63.0
AUR62026591 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.3e-15 85.1 80 56.2
AUR62026138 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.1e-15 84.3 80 60.0
Sopen09g022940 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-14 84.0 76 57.9
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-14 82.0 76 57.9
AUR62016580 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.9e-14 81.6 78 56.4
CsaV3_3G020670 Cucumis sativus L. HOM05D000002 ORTHO05D000001 5.9e-14 81.6 73 58.9
Sopen05g018250 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-14 81.3 84 58.3
Sopen09g024390 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-14 81.3 80 55.0
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-13 80.1 78 55.1
Sopen12g022250 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-13 80.1 76 56.6
AUR62022142 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-13 79.7 80 56.2
AUR62032596 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-13 79.7 80 56.2
AUR62033791 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-13 79.7 80 56.2
AUR62036832 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-13 79.7 80 56.2
AUR62036993 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-13 79.7 80 56.2
Sopen01g007200 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-13 79.3 87 52.9
AUR62034602 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.8e-13 79.0 80 57.5
Ciclev10030259m.g Citrus clementina HOM05D000002 ORTHO05D000001 3.8e-13 79.0 80 58.8
TWI74G1253 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.8e-13 79.0 76 53.9
Manes.04G012950 Manihot esculenta HOM05D000002 ORTHO05D000001 6.5e-13 78.2 76 53.9
Manes.04G013102 Manihot esculenta HOM05D000002 ORTHO05D000001 1.1e-12 77.4 78 52.6
Sopen01g021070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-12 76.6 77 53.2
Sopen10g018480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-12 76.6 80 50.0
HPP92_005122 Vanilla planifolia HOM05D000002 ORTHO05D000001 1.9e-12 76.6 75 52.0
Sopen04g014220 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-12 76.3 79 53.2
AUR62031847 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.2e-12 75.5 72 56.9
CSS0028802 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-12 74.3 68 58.8
MELO3C029502.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.2e-11 73.9 70 55.7
AUR62032586 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-11 73.6 176 32.4
MSTRG.23801 Avicennia marina HOM05D000002 ORTHO05D000001 6.1e-11 71.6 76 52.6
AUR62039609 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.0e-10 69.3 74 52.7
HanXRQChr03g0067731 Helianthus annuus HOM05D000002 ORTHO05D000001 3.0e-10 69.3 76 51.3
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-10 68.9 85 50.6
PSO447G0081 Papaver somniferum HOM05D000002 ORTHO05D000001 8.8e-10 67.8 74 51.4
Sp4g08810 Schrenkiella parvula HOM05D000002 ORTHO05D000001 8.8e-10 67.8 80 48.8
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-09 65.1 76 50.0
Sopen04g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.9 54 55.6
MSTRG.22493 Avicennia marina HOM05D000002 ORTHO05D000001 1.7e-08 63.5 67 44.8
ECA246G5056 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-08 63.5 74 47.3
PSO478G0275 Papaver somniferum HOM05D000002 ORTHO05D000001 2.2e-08 63.2 83 42.2
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 8.2e-08 61.2 158 29.1
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-07 60.1 82 43.9
CSS0002225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 59.7 103 38.8
Hma1.2p1_0084F.1_g043080 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-07 59.7 72 45.8
Hma1.2p1_0784F.1_g217250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-07 59.7 72 45.8
Nn1g04728 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-07 59.7 80 42.5
Nn1g04729 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-07 59.7 80 42.5
Nn7g37206 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-07 59.7 80 41.2
Sopen10g024510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-07 59.7 85 40.0
Dinv00781 Davidia involucrata HOM05D000002 ORTHO05D000001 3.1e-07 59.3 70 45.7
MSTRG.1023 Avicennia marina HOM05D000002 ORTHO05D000001 4.1e-07 58.9 65 44.6
MSTRG.4741 Avicennia marina HOM05D000002 ORTHO05D000001 4.1e-07 58.9 65 44.6
CSS0000424 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.9 77 44.2
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.1e-07 58.9 80 40.0
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.1e-07 58.9 72 43.1
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 5.3e-07 58.5 67 41.8
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-07 58.5 128 31.2
Nn4g26208 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.3e-07 58.5 75 45.3
CSS0014778 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-07 58.2 80 42.5
CSS0040283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-07 58.2 80 38.8
CSS0040555 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-07 58.2 105 35.2
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-07 58.2 72 44.4
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-07 58.2 72 44.4
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-07 58.2 72 44.4
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-07 58.2 72 44.4
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-07 57.8 76 42.1
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-07 57.8 87 39.1
PSO455G0014 Papaver somniferum HOM05D000002 ORTHO05D000001 9.1e-07 57.8 72 43.1
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.0 75 41.3
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.0 80 40.0
CSS0027637 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.0 80 42.5
ECA236G0074 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-06 57.0 67 47.8
Ca_07612_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-06 56.6 68 45.6
Ca_13725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-06 56.6 81 43.2
PSO063G2280 Papaver somniferum HOM05D000002 ORTHO05D000001 2.0e-06 56.6 62 50.0
THA.LOC104820470 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.0e-06 56.6 67 43.3
CSS0015876 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 56.2 77 40.3
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.2 66 43.9
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.2 66 43.9
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.2 66 43.9
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.2 66 43.9
TWI32G0787 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.6e-06 56.2 71 42.3
Atru.chr10.25 Acer truncatum HOM05D000002 ORTHO05D000001 3.5e-06 55.8 72 44.4
CSS0040360 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-06 55.8 77 40.3
Ca_24322_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.5e-06 55.8 65 44.6
Ca_24790_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.5e-06 55.8 81 43.2
Ca_26430_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.5e-06 55.8 81 42.0
Ca_26800_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.5e-06 55.8 81 39.5
Atru.chr10.1 Acer truncatum HOM05D000002 ORTHO05D000001 4.5e-06 55.5 69 44.9
CSS0027562 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 55.5 74 41.9
CSS0036210 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 55.5 80 38.8
CSS0048686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 55.5 75 41.3
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 55.5 75 40.0
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.5e-06 55.5 79 40.5
Nn6g32260 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.5e-06 55.5 70 42.9
CSS0013769 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-06 55.1 75 41.3
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-06 55.1 82 39.0
AUR62027401 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.9e-06 55.1 47 63.8
Ca_05908_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.9e-06 55.1 68 44.1
Ca_06737_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.9e-06 55.1 81 40.7
ECA248G1913 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-06 55.1 79 40.5
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 66 42.4
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 66 42.4
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 66 42.4
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 66 42.4
Sopen11g010290 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 88 37.5
CSS0025880 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 75 41.3
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 76 40.8
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 75 40.0
Ca_13896_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.7e-06 54.7 68 45.6
Ca_19547_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.7e-06 54.7 81 42.0
Gohir.A12G052250 Gossypium hirsutum HOM05D000002 ORTHO05D000001 7.7e-06 54.7 64 42.2
Lalb_Chr15g0084801 Lupinus albus HOM05D000002 ORTHO05D000001 7.7e-06 54.7 68 42.6
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 7.7e-06 54.7 80 37.5
Nn1g02755 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.7e-06 54.7 70 41.4


User provided reference genes

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