Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g011290 Solanum pennellii HOM05D008562 ORTHO05D000001 1.2e-72 276.6 149 100.0
Sopen11g011320 Solanum pennellii HOM05D008562 ORTHO05D000001 1.1e-67 260.0 148 94.6
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-26 123.6 121 62.8
Sopen11g011410 Solanum pennellii HOM05D008562 ORTHO05D009932 3.6e-18 95.5 84 61.9
Sopen00g003000 Solanum pennellii HOM05D008562 ORTHO05D000001 4.8e-18 95.1 84 61.9
CSS0012492 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-17 92.0 73 63.0
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-17 92.0 73 63.0
CSS0036723 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-17 92.0 73 63.0
AUR62026591 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.6e-16 89.4 80 57.5
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-15 86.7 76 59.2
AUR62026138 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.9e-15 85.9 80 60.0
Sopen01g007200 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-15 84.7 139 40.3
Sopen09g022940 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-15 84.3 76 57.9
CsaV3_3G020670 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.1e-14 84.0 73 60.3
AUR62016580 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.9e-14 83.2 78 56.4
Sopen09g024390 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-14 82.4 80 55.0
AUR62022142 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.1e-14 81.3 80 56.2
AUR62032596 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.1e-14 81.3 80 56.2
AUR62033791 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.1e-14 81.3 80 56.2
AUR62036832 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.1e-14 81.3 80 56.2
AUR62036993 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.1e-14 81.3 80 56.2
AUR62034602 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.2e-13 80.5 80 57.5
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-13 80.5 78 55.1
Sopen12g022250 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-13 80.5 76 56.6
Sopen05g018250 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-13 79.7 84 57.1
TWI74G1253 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.7e-13 79.3 76 53.9
HPP92_005122 Vanilla planifolia HOM05D000002 ORTHO05D000001 2.7e-13 79.3 75 53.3
Sopen04g014220 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-13 78.6 79 54.4
Ciclev10030259m.g Citrus clementina HOM05D000002 ORTHO05D000001 6.0e-13 78.2 80 57.5
Sopen01g021070 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-13 78.2 77 53.2
AUR62031847 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-12 77.0 72 56.9
MELO3C029502.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.3e-12 77.0 70 57.1
Manes.04G012950 Manihot esculenta HOM05D000002 ORTHO05D000001 1.8e-12 76.6 76 52.6
Manes.04G013102 Manihot esculenta HOM05D000002 ORTHO05D000001 3.0e-12 75.9 78 51.3
Sopen10g018480 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-12 75.5 80 48.8
CSS0028802 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-12 75.1 69 58.0
AUR62032586 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.1e-11 73.9 80 50.0
MSTRG.23801 Avicennia marina HOM05D000002 ORTHO05D000001 2.5e-11 72.8 76 52.6
HanXRQChr03g0067731 Helianthus annuus HOM05D000002 ORTHO05D000001 5.6e-11 71.6 76 52.6
AUR62039609 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-10 70.1 74 52.7
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-10 70.1 85 50.6
PSO447G0081 Papaver somniferum HOM05D000002 ORTHO05D000001 4.8e-10 68.6 74 51.4
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-09 67.0 76 51.3
ECA246G5056 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-09 64.7 74 47.3
Sp4g08810 Schrenkiella parvula HOM05D000002 ORTHO05D000001 9.0e-09 64.3 80 46.2
Sopen04g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-08 63.9 54 55.6
PSO478G0275 Papaver somniferum HOM05D000002 ORTHO05D000001 1.5e-08 63.5 83 42.2
MSTRG.22493 Avicennia marina HOM05D000002 ORTHO05D000001 5.8e-08 61.6 68 44.1
CSS0040555 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.6e-08 61.2 116 33.6
Sopen10g024510 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-08 61.2 103 35.9
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-08 60.8 82 43.9
CSS0002225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 94 40.4
Hma1.2p1_0084F.1_g043080 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-07 60.5 72 45.8
Hma1.2p1_0784F.1_g217250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-07 60.5 72 45.8
Nn1g04728 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-07 60.5 80 42.5
Nn1g04729 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-07 60.5 80 42.5
Nn7g37206 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-07 60.5 80 41.2
Ca_24322_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.7e-07 60.1 65 46.2
PSO455G0014 Papaver somniferum HOM05D000002 ORTHO05D000001 1.7e-07 60.1 72 44.4
CSS0000424 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-07 59.7 77 44.2
Nn4g26208 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.2e-07 59.7 75 45.3
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.2e-07 59.7 80 40.0
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.2e-07 59.7 72 43.1
Dinv00781 Davidia involucrata HOM05D000002 ORTHO05D000001 2.9e-07 59.3 70 45.7
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-07 59.3 72 44.4
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-07 59.3 72 44.4
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-07 59.3 72 44.4
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-07 59.3 72 44.4
MSTRG.1023 Avicennia marina HOM05D000002 ORTHO05D000001 3.8e-07 58.9 66 43.9
MSTRG.4741 Avicennia marina HOM05D000002 ORTHO05D000001 3.8e-07 58.9 66 43.9
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-07 58.9 87 39.1
Lalb_Chr15g0084801 Lupinus albus HOM05D000002 ORTHO05D000001 3.8e-07 58.9 68 44.1
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-07 58.9 144 29.9
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 4.9e-07 58.5 68 41.2
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-07 58.5 76 42.1
CSS0040283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-07 58.5 80 38.8
Ca_04987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.9e-07 58.5 67 46.3
Ca_05908_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.4e-07 58.2 68 45.6
THA.LOC104820470 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.4e-07 58.2 68 44.1
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-07 57.8 75 41.3
Ca_07612_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.4e-07 57.8 68 45.6
Ca_13725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.4e-07 57.8 81 43.2
Atru.chr10.25 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-06 57.4 72 44.4
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 87 37.9
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 66 43.9
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 66 43.9
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 66 43.9
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 66 43.9
CSS0014778 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 80 42.5
CSS0015876 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 77 40.3
Ca_24790_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-06 57.0 81 43.2
Ca_26430_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-06 57.0 81 42.0
Ca_26800_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-06 57.0 81 39.5
SHI31680 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 57.0 108 38.9
TWI32G0787 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 71 42.3
Atru.chr10.1 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-06 56.6 69 44.9
EL10Ac8g19578 Beta vulgaris HOM05D000002 ORTHO05D000001 1.9e-06 56.6 77 41.6
CSS0040360 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 77 40.3
ECA248G1913 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 79 41.8
CSS0027562 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 74 41.9
CSS0036210 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 80 38.8
CSS0048686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 75 41.3
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 75 40.0
Ca_06737_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-06 56.2 81 40.7
Gohir.A12G052250 Gossypium hirsutum HOM05D000002 ORTHO05D000001 2.4e-06 56.2 64 42.2
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-06 56.2 79 40.5
Nn6g32260 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-06 56.2 70 42.9
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 75 38.7
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 66 42.4
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 66 42.4
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 66 42.4
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 66 42.4
CSS0013769 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-06 55.8 75 41.3
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-06 55.8 80 40.0
CSS0027637 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-06 55.8 80 42.5
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-06 55.8 82 39.0
Ca_13896_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.2e-06 55.8 68 45.6
Ca_19547_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.2e-06 55.8 81 42.0
ECA232G2478 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-06 55.8 72 41.7
ECA233G2364 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-06 55.8 72 41.7
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.2e-06 55.8 75 41.3
Sopen09g023360 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 82 39.0
Sopen11g010290 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 88 37.5
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-06 55.5 83 38.6
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-06 55.5 83 38.6
CSS0025880 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-06 55.5 75 41.3
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-06 55.5 76 40.8
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-06 55.5 75 40.0
Ca_11022_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.2e-06 55.5 82 40.2
Ca_26127_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.2e-06 55.5 81 42.0
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 4.2e-06 55.5 80 37.5
Nn1g02755 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.2e-06 55.5 70 41.4
Sopen03g020180 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-06 55.5 66 42.4
TWI60G0947 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 4.2e-06 55.5 57 43.9
Ca_06584_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.5e-06 55.1 81 40.7
Ca_18229_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.5e-06 55.1 81 42.0
Ca_18240_v3 Cicer arietinum L. HOM05D000747 ORTHO05D001683 5.5e-06 55.1 81 40.7
CsaV3_6G019120 Cucumis sativus L. HOM05D000002 ORTHO05D000001 5.5e-06 55.1 57 47.4
ECA233G3173 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.1 85 38.8
ECA238G1149 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.1 90 37.8
ECA240G2946 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.1 90 37.8
ECA247G1119 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.1 85 38.8
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.1 90 37.8
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.1 90 37.8
Sopen12g027470 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 47 55.3
CSS0008000 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 7.1e-06 54.7 122 29.5
CSS0045806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-06 54.7 80 35.0
Ca_11467_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.1e-06 54.7 68 45.6
Ca_17143_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.1e-06 54.7 68 44.1
PSO478G2780 Papaver somniferum HOM05D000002 ORTHO05D000001 7.1e-06 54.7 72 40.3
SHI10925 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-06 54.7 99 37.4
Sopen02g011630 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.7 82 40.2
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.7 70 42.9
Sopen07g013220 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.7 77 40.3
Ca_05343_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.3e-06 54.3 81 42.0
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.3e-06 54.3 90 37.8
ECA238G0426 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.3e-06 54.3 90 37.8
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.3e-06 54.3 60 41.7
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.3e-06 54.3 71 40.8
Nn8g40241 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.3e-06 54.3 57 43.9
PSO832G4595 Papaver somniferum HOM05D000002 ORTHO05D000001 9.3e-06 54.3 83 41.0
SHI03125 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-06 54.3 95 37.9
SEGI_00603 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 9.3e-06 54.3 91 37.4
TWI77G0407 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.3e-06 54.3 72 38.9


User provided reference genes

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