Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 4.8e-81 304.3 139 100.0
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.7e-49 198.4 142 64.1
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 9.2e-48 193.7 95 91.6
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 3.4e-42 175.3 133 60.2
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.4e-40 169.9 154 55.2
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.2e-39 166.8 133 58.6
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 8.6e-38 160.6 128 55.5
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.1e-37 160.2 108 68.5
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.3e-37 158.7 128 56.2
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 4.3e-37 158.3 135 56.3
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 9.2e-32 140.6 142 45.8
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 1.9e-29 132.9 117 51.3
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 9.5e-29 130.6 128 48.4
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 2.8e-28 129.0 128 46.9
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.8e-28 129.0 128 46.9
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.2e-28 127.9 128 47.7
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 8.1e-28 127.5 118 50.0
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 8.1e-28 127.5 128 48.4
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 1.4e-27 126.7 128 46.1
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.3e-27 125.9 126 47.6
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 3.1e-27 125.6 128 47.7
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 3.1e-27 125.6 128 47.7
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 6.8e-27 124.4 128 45.3
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.6e-26 122.5 128 46.1
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 7.6e-26 120.9 113 50.4
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.7e-25 119.8 128 46.9
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.7e-25 119.8 128 46.9
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.4e-24 116.7 128 45.3
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.2e-24 115.5 128 43.0
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.6e-23 113.2 117 46.2
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 6.6e-22 107.8 119 45.4
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.5e-21 106.7 117 43.6
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 5.6e-21 104.8 113 43.4
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 7.3e-21 104.4 123 40.7
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.2e-20 103.6 118 41.5
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.8e-20 102.4 118 40.7
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 1.1e-19 100.5 115 40.0
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 2.4e-19 99.4 113 38.1
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 6.8e-19 97.8 123 38.2
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 1.1e-16 90.5 126 31.7
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 1.4e-11 73.6 89 41.6
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 4.4e-10 68.6 74 36.5
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 2.9e-09 65.9 64 40.6
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.9e-09 65.9 131 29.0
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 8.4e-09 64.3 65 38.5
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.9e-08 63.2 64 42.2
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 4.2e-08 62.0 65 40.0
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 5.4e-08 61.6 64 37.5
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 5.4e-08 61.6 62 41.9
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 2.1e-07 59.7 62 40.3
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 2.1e-07 59.7 62 40.3
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 2.7e-07 59.3 64 42.2
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 4.6e-07 58.5 65 35.4
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 6.0e-07 58.2 65 35.4
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 3.9e-06 55.5 51 45.1


User provided reference genes

Program Settings