Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 0.0e+00 1166.4 580 100.0
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 0.0e+00 1159.8 580 99.1
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 0.0e+00 1120.9 581 96.4
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 2.2e-289 998.4 589 88.1
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 2.6e-269 931.8 600 83.7
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 5.9e-258 894.0 548 84.9
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.2e-213 746.9 615 68.1
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 7.6e-213 744.2 591 70.9
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 9.3e-211 737.3 588 68.4
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 9.3e-211 737.3 518 74.7
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 3.5e-210 735.3 593 68.6
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 4.3e-208 728.4 608 64.6
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 3.1e-206 722.2 512 74.2
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 5.3e-206 721.5 566 69.3
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 5.3e-206 721.5 534 70.2
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 9.0e-206 720.7 519 73.4
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 9.0e-206 720.7 604 66.6
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.6e-205 719.2 600 66.8
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 4.5e-205 718.4 561 69.5
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.4e-204 714.5 610 64.9
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.5e-203 711.4 600 65.0
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.2e-202 710.3 617 64.3
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 1.2e-202 710.3 604 65.4
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.2e-202 710.3 600 65.8
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 6.0e-202 708.0 602 65.3
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.8e-201 706.4 567 67.0
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 2.3e-201 706.1 514 72.0
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.5e-200 702.6 600 64.3
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.5e-200 702.6 615 64.6
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.6e-199 699.9 452 78.5
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 2.8e-199 699.1 501 74.7
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 6.2e-199 698.0 590 64.7
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 8.2e-199 697.6 502 72.7
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.1e-198 697.2 607 64.1
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.4e-198 696.8 509 70.9
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 1.4e-198 696.8 585 66.5
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 1.8e-198 696.4 591 65.3
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.8e-198 696.4 588 63.6
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 3.1e-198 695.7 583 65.9
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 2.6e-197 692.6 597 64.3
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 2.6e-197 692.6 598 64.9
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 3.4e-197 692.2 590 65.9
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 4.5e-197 691.8 451 77.6
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 5.8e-197 691.4 595 63.7
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 7.6e-197 691.0 619 62.7
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.0e-196 690.6 608 64.1
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.0e-196 690.6 591 64.3
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.3e-196 690.3 560 66.2
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.7e-196 689.9 417 82.0
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.2e-196 689.5 611 63.5
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 8.4e-196 687.6 591 63.6
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 1.4e-195 686.8 618 62.5
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 1.4e-195 686.8 601 64.2
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.9e-195 686.4 601 63.4
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 2.5e-195 686.0 535 68.0
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 2.5e-195 686.0 605 64.3
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.5e-195 686.0 442 78.1
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 4.2e-195 685.3 515 70.3
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.5e-195 684.9 620 62.6
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 7.1e-195 684.5 443 77.4
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 9.3e-195 684.1 457 75.1
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 9.3e-195 684.1 591 63.5
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.9e-194 681.0 550 67.5
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.0e-193 680.6 584 61.8
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.3e-193 680.2 505 69.1
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.3e-193 680.2 595 63.0
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.8e-193 679.9 596 62.9
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 8.7e-193 677.6 530 67.9
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 5.7e-192 674.9 586 63.8
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 9.7e-192 674.1 590 63.9
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 2.2e-191 672.9 601 63.1
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 8.2e-191 671.0 586 64.2
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.4e-190 670.2 606 62.5
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 4.1e-190 668.7 609 63.1
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 4.1e-190 668.7 584 63.2
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 5.3e-190 668.3 592 62.2
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 9.0e-190 667.5 593 62.2
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.5e-189 666.8 599 62.4
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 2.6e-189 666.0 582 63.4
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 5.9e-189 664.8 406 80.8
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 7.7e-189 664.5 408 80.1
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.0e-188 664.1 598 62.2
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 1.7e-188 663.3 588 63.3
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.7e-188 663.3 606 62.5
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 2.9e-188 662.5 507 70.0
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 3.8e-188 662.1 479 71.8
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 5.0e-188 661.8 412 79.1
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.1e-187 660.6 578 65.1
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.5e-187 659.4 571 64.1
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.6e-186 656.8 603 59.7
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 3.6e-186 655.6 427 77.3
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 3.6e-186 655.6 589 61.3
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 4.6e-186 655.2 496 68.1
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 6.1e-186 654.8 601 60.9
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 6.1e-186 654.8 529 66.7
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 7.9e-186 654.4 586 61.8
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 1.0e-185 654.1 439 75.4
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.4e-185 653.7 407 79.9
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 8.8e-185 651.0 591 62.8
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.1e-184 650.6 507 66.3
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 3.3e-184 649.0 408 78.7
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.8e-182 643.3 585 61.9
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 3.1e-182 642.5 479 69.1
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 3.4e-181 639.0 555 62.0
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.3e-180 637.1 414 77.1
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.2e-180 636.3 501 67.3
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.2e-180 636.3 583 62.4
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 6.5e-180 634.8 597 60.0
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 7.2e-179 631.3 495 66.3
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 9.4e-179 630.9 585 60.9
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.2e-178 630.6 598 60.2
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.2e-178 630.6 604 59.9
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.1e-178 629.8 406 76.1
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 2.7e-178 629.4 473 69.3
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 6.1e-178 628.2 595 60.0
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 7.9e-178 627.9 620 58.4
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.4e-177 627.1 596 59.7
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 5.1e-177 625.2 588 60.0
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 6.7e-177 624.8 542 63.7
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 1.1e-176 624.0 593 59.9
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 1.1e-176 624.0 609 57.6
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 1.5e-176 623.6 594 59.6
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 2.6e-176 622.9 592 60.1
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 7.4e-176 621.3 575 59.5
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 2.2e-175 619.8 568 62.3
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 3.7e-175 619.0 579 60.3
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 8.2e-175 617.8 542 61.3
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 8.2e-175 617.8 545 62.4
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 7.0e-174 614.8 575 60.2
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 2.0e-173 613.2 467 69.4
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 2.0e-173 613.2 467 69.4
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 4.2e-171 605.5 481 66.5
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 4.2e-171 605.5 481 66.5
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 4.2e-171 605.5 481 66.5
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 5.0e-164 582.0 444 67.3
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.9e-163 580.1 361 80.1
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.2e-144 517.7 350 70.9
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 2.8e-143 513.1 426 62.2
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 6.3e-143 511.9 442 59.7
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.9e-140 502.7 436 59.6
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.1e-134 484.6 374 67.1
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 2.5e-131 473.4 365 64.4
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.4e-129 467.6 313 71.2
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 1.6e-98 364.4 209 80.9
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 2.0e-96 357.5 381 49.9
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.3e-92 344.7 197 81.2
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.1e-92 342.8 394 55.6
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 2.1e-82 310.8 180 80.0
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 7.4e-75 285.8 247 60.3
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 4.1e-73 280.0 159 81.8
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.3e-73 279.6 156 83.3
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.3e-73 279.6 156 83.3
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.9e-70 271.2 474 38.8
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 7.7e-64 249.2 362 39.2
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.8e-58 230.7 191 67.5
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 8.5e-55 219.2 302 39.4
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.8e-49 201.4 157 70.1
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.7e-47 194.9 270 38.9
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 4.1e-41 173.7 109 76.1
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 1.0e-39 169.1 187 52.4
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.4e-35 154.1 110 65.5
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 1.3e-31 142.1 147 53.7
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.1e-30 139.0 88 73.9
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 2.5e-30 137.9 209 35.9
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 1.2e-29 135.6 83 73.5
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 3.6e-29 134.0 127 55.1
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 3.6e-29 134.0 231 43.3
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 1.8e-28 131.7 83 71.1
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.4e-25 122.1 101 66.3
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 3.3e-22 110.9 117 51.3
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 4.9e-18 97.1 100 56.0
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 2.3e-15 88.2 111 46.8
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 6.6e-15 86.7 94 54.3
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.5e-14 85.5 175 35.4
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 6.8e-12 76.6 48 72.9
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 4.1e-09 67.4 127 40.2
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 9.2e-09 66.2 66 59.1
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 6.6e-07 60.1 31 83.9


User provided reference genes

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