Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 2.3e-148 528.9 266 100.0
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.5e-126 454.5 267 87.6
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.3e-103 380.2 266 75.9
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 8.1e-77 291.2 280 60.0
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 2.4e-76 289.7 274 58.0
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.4e-73 279.6 279 58.8
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 3.2e-73 279.3 279 58.4
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.4e-73 278.5 281 55.2
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.0e-72 275.0 280 54.6
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.4e-59 232.6 279 51.3
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 9.9e-59 231.1 285 48.8
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.8e-58 229.2 277 50.5
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 3.9e-55 219.2 183 57.4
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.5e-54 217.2 183 57.9
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 4.3e-54 215.7 184 58.2
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.1e-53 213.4 184 57.6
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.8e-53 213.0 184 56.0
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 4.8e-53 212.2 228 57.0
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 6.2e-53 211.8 182 57.7
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 1.4e-52 210.7 182 57.1
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 2.4e-52 209.9 183 55.7
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 2.4e-52 209.9 183 56.8
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.3e-52 208.8 280 48.6
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 2.0e-51 206.8 184 56.5
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 3.4e-51 206.1 187 55.6
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 7.6e-51 204.9 251 45.0
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 9.9e-51 204.5 183 55.7
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 9.9e-51 204.5 183 55.2
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 2.2e-50 203.4 184 54.9
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 4.9e-50 202.2 187 54.5
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 6.4e-50 201.8 185 53.5
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.1e-49 201.1 235 47.2
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-49 201.1 185 53.5
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.4e-49 200.7 185 52.4
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 1.4e-49 200.7 216 50.0
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 2.4e-49 199.9 188 52.7
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 2.4e-49 199.9 184 55.4
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-49 199.9 185 53.0
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.2e-49 199.1 185 53.0
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 7.1e-49 198.4 184 54.9
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 7.1e-49 198.4 205 52.2
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 7.1e-49 198.4 185 53.0
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 9.3e-49 198.0 190 52.1
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 9.3e-49 198.0 225 47.6
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 1.6e-48 197.2 186 51.6
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 2.7e-48 196.4 183 52.5
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.6e-48 195.7 185 52.4
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 4.6e-48 195.7 186 52.2
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 6.0e-48 195.3 214 48.6
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 6.0e-48 195.3 183 50.8
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 7.9e-48 194.9 184 52.2
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 7.9e-48 194.9 185 52.4
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 1.8e-47 193.7 252 42.1
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 1.8e-47 193.7 191 51.8
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 2.3e-47 193.4 260 45.0
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.1e-46 191.0 184 52.7
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.1e-46 191.0 184 50.5
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.1e-46 191.0 184 50.5
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 1.1e-46 191.0 184 52.2
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.5e-46 190.7 184 51.6
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 4.3e-46 189.1 184 50.0
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 5.6e-46 188.7 234 44.9
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 7.4e-46 188.3 184 51.6
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.3e-45 187.6 184 52.2
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 2.8e-45 186.4 240 44.2
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 4.8e-45 185.7 184 51.6
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 8.2e-45 184.9 184 54.3
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 8.2e-45 184.9 184 50.5
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.1e-44 184.5 183 50.8
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.1e-44 184.5 236 41.5
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 1.8e-44 183.7 184 52.7
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 6.9e-44 181.8 215 47.9
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 9.0e-44 181.4 197 48.7
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.3e-42 177.6 221 44.3
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 1.4e-41 174.1 226 43.8
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 2.5e-41 173.3 181 47.0
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 4.2e-41 172.6 209 43.5
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 4.2e-41 172.6 192 49.0
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 7.1e-41 171.8 153 52.3
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.2e-40 171.0 189 46.0
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 6.0e-40 168.7 186 46.8
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 7.9e-40 168.3 185 46.5
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.0e-39 167.9 186 46.8
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.0e-39 167.9 213 43.7
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 1.8e-39 167.2 186 46.2
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 1.8e-39 167.2 186 46.8
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 1.8e-39 167.2 186 46.8
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 3.9e-39 166.0 229 41.5
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 3.9e-39 166.0 186 46.2
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 6.7e-39 165.2 185 46.5
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.5e-38 164.1 185 45.9
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 2.5e-38 163.3 182 46.7
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 4.3e-38 162.5 185 46.5
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.3e-37 161.0 145 54.5
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.6e-37 160.6 185 45.9
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.6e-37 160.6 159 51.6
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 3.7e-37 159.5 232 41.4
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 6.3e-37 158.7 144 54.2
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.1e-36 157.9 185 45.4
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.0e-34 151.4 186 42.5
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 7.2e-33 145.2 252 35.7
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 6.7e-31 138.7 171 45.0
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 8.8e-31 138.3 114 57.9
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.9e-25 120.6 133 45.1
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.9e-25 120.6 115 51.3
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 3.9e-23 112.8 153 40.5
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.1e-22 111.3 116 52.6
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.4e-20 104.4 115 47.0
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.8e-20 104.0 115 45.2
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.1e-20 102.8 128 47.7
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 9.1e-20 101.7 111 46.8
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 1.2e-19 101.3 115 48.7
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.7e-18 97.4 131 42.0
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.6e-16 90.9 136 40.4
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.1e-14 84.7 95 47.4
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 7.4e-14 82.0 125 41.6
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.4e-12 77.8 119 40.3
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-12 76.6 117 29.9


User provided reference genes

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