Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g010130 Solanum pennellii HOM05D011918 ORTHO05D010161 1.4e-90 336.3 168 100.0
PGSC0003DMG400027610 Solanum tuberosum HOM05D000196 ORTHO05D010161 1.2e-62 243.4 166 75.3
Solyc11g019990.4 Solanum lycopersicum HOM05D011918 ORTHO05D010161 3.2e-55 218.8 123 91.1
Sopen11g010100 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-54 216.9 111 91.9
Sopen09g005070 Solanum pennellii HOM05D000196 ORTHO05D010161 4.2e-39 165.2 155 57.4
Sopen10g022060 Solanum pennellii HOM05D000196 ORTHO05D010161 8.8e-37 157.5 188 45.7
CAN.G125.17 Capsicum annuum HOM05D000196 ORTHO05D010161 2.6e-36 156.0 151 55.6
CAN.G125.19 Capsicum annuum HOM05D000196 ORTHO05D010161 4.4e-36 155.2 151 55.6
PGSC0003DMG400047331 Solanum tuberosum HOM05D000196 ORTHO05D010161 1.8e-34 149.8 199 41.7
Solyc10g050420.3 Solanum lycopersicum HOM05D000196 ORTHO05D010161 3.1e-34 149.1 184 44.6
Peaxi162Scf00000g51014 Petunia axillaris HOM05D000196 ORTHO05D010161 2.3e-29 132.9 215 38.1
Peaxi162Scf00683g00033 Petunia axillaris HOM05D000196 ORTHO05D010161 3.0e-29 132.5 214 38.8
Peaxi162Scf00146g00006 Petunia axillaris HOM05D000196 ORTHO05D010161 3.4e-28 129.0 221 37.1
Solyc04g051080.2 Solanum lycopersicum HOM05D000196 ORTHO05D010161 9.8e-28 127.5 200 38.0
PGSC0003DMG400035432 Solanum tuberosum HOM05D000196 ORTHO05D010161 4.8e-27 125.2 202 36.1
Solyc07g009110.3 Solanum lycopersicum HOM05D000196 ORTHO05D010161 1.3e-24 117.1 172 40.7
PGSC0003DMG400035888 Solanum tuberosum HOM05D000196 ORTHO05D010161 3.8e-24 115.5 191 36.6
Peaxi162Scf00153g01211 Petunia axillaris HOM05D000196 ORTHO05D010161 1.5e-23 113.6 205 37.1
Solyc03g083340.3 Solanum lycopersicum HOM05D000196 ORTHO05D010161 2.5e-23 112.8 128 50.0
Sopen03g023090 Solanum pennellii HOM05D000196 ORTHO05D010161 2.5e-23 112.8 132 48.5
Peaxi162Scf00005g00111 Petunia axillaris HOM05D011918 ORTHO05D010161 9.4e-23 110.9 208 34.6
Oeu038471.1 Olea europaea HOM05D000495 ORTHO05D000357 1.6e-22 110.2 171 37.4
Oeu031936.1 Olea europaea HOM05D000196 ORTHO05D010161 2.3e-21 106.3 171 36.8
PGSC0003DMG400043976 Solanum tuberosum HOM05D011918 ORTHO05D010161 4.4e-20 102.1 201 35.3
Oeu035092.1 Olea europaea HOM05D000196 ORTHO05D010161 2.2e-19 99.8 170 35.9
Oeu012972.1 Olea europaea HOM05D000196 ORTHO05D010161 1.1e-18 97.4 157 35.7
Oeu012973.1 Olea europaea HOM05D000196 ORTHO05D010161 1.1e-18 97.4 157 35.7
Oeu012974.1 Olea europaea HOM05D000196 ORTHO05D010161 1.2e-17 94.0 163 38.0
Oeu026252.1 Olea europaea HOM05D000196 ORTHO05D010161 7.7e-17 91.3 200 32.5
PGSC0003DMG400036015 Solanum tuberosum HOM05D011918 ORTHO05D010161 7.7e-17 91.3 178 34.8
PGSC0003DMG400004864 Solanum tuberosum HOM05D011918 ORTHO05D010161 1.3e-16 90.5 166 34.3
SGA_v2.0_scaffold4G02065 Striga asiatica HOM05D000196 ORTHO05D010161 3.8e-16 89.0 168 32.1
SGA_v2.0_scaffold232G43519 Striga asiatica HOM05D000196 ORTHO05D010161 5.0e-16 88.6 160 38.8
SGA_v2.0_scaffold68G22855 Striga asiatica HOM05D000196 ORTHO05D010161 5.0e-16 88.6 187 31.0
Migut.N01838 Erythranthe guttata HOM05D000196 ORTHO05D010161 2.5e-15 86.3 172 29.7
Oeu043659.1 Olea europaea HOM05D000196 ORTHO05D010161 3.3e-15 85.9 178 36.0
Oeu043653.1 Olea europaea HOM05D000196 ORTHO05D010161 4.3e-15 85.5 177 31.6
Migut.N01841 Erythranthe guttata HOM05D000196 ORTHO05D010161 1.2e-14 84.0 170 31.2
SalBow6G5556 Salvia bowleyana HOM05D000196 ORTHO05D010161 1.2e-14 84.0 194 29.9
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 1.2e-14 84.0 158 34.2
Dinv17522 Davidia involucrata HOM05D000196 ORTHO05D010161 4.7e-14 82.0 191 30.9
SGA_v2.0_scaffold71G23851 Striga asiatica HOM05D000196 ORTHO05D010161 1.4e-13 80.5 194 29.9
Nitab4.5_0001456g0080 Nicotiana tabacum HOM05D011918 ORTHO05D010161 2.3e-13 79.7 158 38.0
SGA_v2.0_scaffold265G46073 Striga asiatica HOM05D000196 ORTHO05D010161 5.2e-13 78.6 168 29.2
unitig_749.g14046 Utricularia gibba HOM05D000196 ORTHO05D010161 5.2e-13 78.6 155 29.7
Rhsim08G0129600 Rhododendron simsii HOM05D000196 ORTHO05D010161 6.8e-13 78.2 196 29.6
SGA_v2.0_scaffold45G17004 Striga asiatica HOM05D000196 ORTHO05D010161 1.5e-12 77.0 134 32.1
Actinidia17114 Actinidia chinensis HOM05D000196 ORTHO05D010161 4.4e-12 75.5 183 29.0
unitig_699.g19653 Utricularia gibba HOM05D000196 ORTHO05D010161 4.4e-12 75.5 189 31.7
Oeu017164.1 Olea europaea HOM05D000196 ORTHO05D010161 1.7e-11 73.6 156 29.5
Cc02_g31030 Coffea canephora HOM05D000196 ORTHO05D010161 1.8e-10 70.1 108 39.8
SalBow7G4429 Salvia bowleyana HOM05D000196 ORTHO05D010161 3.2e-10 69.3 192 29.2
Oeu043660.1 Olea europaea HOM05D000196 ORTHO05D010161 7.0e-10 68.2 134 35.8
SalBow2G1838 Salvia bowleyana HOM05D000196 ORTHO05D000279 1.3e-08 63.9 164 29.9
SalBow6G6831 Salvia bowleyana HOM05D000196 ORTHO05D010161 1.3e-08 63.9 152 27.0
SalBow6G4740 Salvia bowleyana HOM05D000196 ORTHO05D010161 2.3e-08 63.2 152 27.0
Migut.D00936 Erythranthe guttata HOM05D000196 ORTHO05D010161 3.0e-08 62.8 244 24.6
PGSC0003DMG400045841 Solanum tuberosum HOM05D011918 ORTHO05D010161 8.6e-08 61.2 98 40.8
Nitab4.5_0005692g0030 Nicotiana tabacum HOM05D011918 ORTHO05D010161 1.1e-07 60.8 119 38.7
VMungo1127G2042 Vigna mungo HOM05D000196 ORTHO05D012687 1.9e-07 60.1 150 24.7
SalBow7G0581 Salvia bowleyana HOM05D000196 ORTHO05D010161 2.5e-07 59.7 155 27.7
unitig_699.g19652 Utricularia gibba HOM05D000196 ORTHO05D010161 3.3e-07 59.3 141 28.4
Medtr4g021845 Medicago truncatula HOM05D000196 ORTHO05D000279 4.3e-07 58.9 156 29.5
PGSC0003DMG400034709 Solanum tuberosum HOM05D011918 ORTHO05D010161 4.3e-07 58.9 38 63.2
TAR626G0497 Trochodendron aralioides HOM05D000196 ORTHO05D000279 4.3e-07 58.9 159 27.0
Lsat_1_v5_gn_5_39921 Lactuca sativa HOM05D000196 ORTHO05D000279 9.5e-07 57.8 149 30.9
Atru.chr5.1072 Acer truncatum HOM05D000196 ORTHO05D000279 1.2e-06 57.4 184 26.6
Oeu043657.1 Olea europaea HOM05D000196 ORTHO05D010161 2.8e-06 56.2 147 28.6
TWI59G0561 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 3.6e-06 55.8 173 27.7
unitig_0.g1003 Utricularia gibba HOM05D000196 ORTHO05D010161 3.6e-06 55.8 109 31.2
CARHR172940 Cardamine hirsuta HOM05D000196 ORTHO05D015337 4.7e-06 55.5 158 27.2
Medtr4g021855 Medicago truncatula HOM05D000196 ORTHO05D000279 4.7e-06 55.5 157 27.4
SalBow6G2906 Salvia bowleyana HOM05D000196 ORTHO05D010161 4.7e-06 55.5 104 30.8
Thhalv10006452m.g Eutrema salsugineum HOM05D000196 ORTHO05D015337 6.2e-06 55.1 166 25.9
CsaV3_1G031510 Cucumis sativus L. HOM05D000196 ORTHO05D000279 8.0e-06 54.7 148 28.4
Lj6g0003304 Lotus japonicus HOM05D000196 ORTHO05D000279 8.0e-06 54.7 168 28.6


User provided reference genes

Program Settings