Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g009750 Solanum pennellii HOM05D001163 ORTHO05D001769 3.3e-65 251.5 122 100.0
PGSC0003DMG400007157 Solanum tuberosum HOM05D001163 ORTHO05D001769 5.6e-41 171.0 106 83.0
Solyc06g074760.2 Solanum lycopersicum HOM05D001163 ORTHO05D001769 5.2e-39 164.5 106 79.2
Sopen06g031200 Solanum pennellii HOM05D001163 ORTHO05D001769 2.2e-37 159.1 106 78.3
Solyc11g066500.2 Solanum lycopersicum HOM05D001163 ORTHO05D001769 9.6e-17 90.5 107 50.5
Peaxi162Scf00150g10111 Petunia axillaris HOM05D001163 ORTHO05D001769 1.6e-16 89.7 104 47.1
Sopen11g026250 Solanum pennellii HOM05D001163 ORTHO05D001769 4.8e-16 88.2 107 49.5
Nitab4.5_0000173g0250 Nicotiana tabacum HOM05D001163 ORTHO05D001769 6.2e-16 87.8 95 48.4
PGSC0003DMG400000421 Solanum tuberosum HOM05D001163 ORTHO05D001769 6.2e-16 87.8 107 48.6
SalBow3G4362 Salvia bowleyana HOM05D001163 ORTHO05D001769 5.1e-10 68.2 93 43.0
Oeu056660.1 Olea europaea HOM05D001163 ORTHO05D001769 2.5e-09 65.9 95 40.0
Cc01_g10160 Coffea canephora HOM05D001163 ORTHO05D001769 9.6e-09 63.9 111 36.9
GSVIVG01031449001 Vitis vinifera HOM05D001163 ORTHO05D001769 9.6e-09 63.9 106 37.7
Dinv12572 Davidia involucrata HOM05D001163 ORTHO05D001769 1.3e-08 63.5 105 40.0
MSTRG.12347 Avicennia marina HOM05D001163 ORTHO05D001769 2.1e-08 62.8 84 44.0
Actinidia38893 Actinidia chinensis HOM05D001163 ORTHO05D001769 1.4e-07 60.1 113 37.2
FAN11G0081 Fragaria x ananassa HOM05D001163 ORTHO05D001769 5.3e-07 58.2 105 38.1
FvH4_3g30470 Fragaria vesca HOM05D001163 ORTHO05D001769 6.9e-07 57.8 105 38.1
Oeu008365.2 Olea europaea HOM05D001163 ORTHO05D001769 6.9e-07 57.8 113 33.6
Nitab4.5_0000255g0020 Nicotiana tabacum HOM05D001163 ORTHO05D001769 1.2e-06 57.0 120 35.0
TAR623G0804 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.0e-06 56.2 113 36.3
TAR629G3448 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.0e-06 56.2 113 36.3
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.0e-06 56.2 113 36.3
MSTRG.18708 Avicennia marina HOM05D001163 ORTHO05D001769 3.4e-06 55.5 102 35.3
CSS0007886 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 3.4e-06 55.5 101 33.7
Sopen11g003770 Solanum pennellii HOM05D001163 ORTHO05D001769 3.4e-06 55.5 120 35.8
CSS0042627 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 4.5e-06 55.1 101 32.7
FAN21G1489 Fragaria x ananassa HOM05D001163 ORTHO05D001769 4.5e-06 55.1 104 36.5
FAN25G2281 Fragaria x ananassa HOM05D001163 ORTHO05D001769 4.5e-06 55.1 104 36.5
Nn2g13882 Nelumbo nucifera HOM05D001163 ORTHO05D001769 4.5e-06 55.1 111 35.1
Solyc11g007910.2 Solanum lycopersicum HOM05D001163 ORTHO05D001769 4.5e-06 55.1 120 35.8
RcHm_v2.0_Chr5g0056421 Rosa chinensis HOM05D001163 ORTHO05D001769 5.8e-06 54.7 112 33.9
Actinidia06719 Actinidia chinensis HOM05D001163 ORTHO05D001769 7.6e-06 54.3 107 38.3
HanXRQChr14g0456141 Helianthus annuus HOM05D001163 ORTHO05D001769 7.6e-06 54.3 117 36.8
Cfa010135 Carpinus fangiana HOM05D001163 ORTHO05D001769 1.0e-05 53.9 114 35.1
CDE06G1402 Ceratophyllum demersum HOM05D001163 ORTHO05D001769 1.0e-05 53.9 105 39.0
FAN16G2557 Fragaria x ananassa HOM05D001163 ORTHO05D001769 1.0e-05 53.9 104 35.6
Gohir.A05G084700 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.0e-05 53.9 96 37.5


User provided reference genes

Program Settings