Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g009360 Solanum pennellii HOM05D011855 ORTHO05D011609 1.0e-154 550.1 286 100.0
Solyc11g017410.1 Solanum lycopersicum HOM05D011855 ORTHO05D011609 2.0e-150 535.8 286 97.2
PGSC0003DMG400009225 Solanum tuberosum HOM05D011855 ORTHO05D011609 7.5e-137 490.7 286 89.9
CAN.G370.24 Capsicum annuum HOM05D011855 ORTHO05D011609 4.0e-106 388.7 281 74.7
Nitab4.5_0000560g0170 Nicotiana tabacum HOM05D011855 ORTHO05D011609 6.4e-88 328.2 290 66.2
CAN.G1530.2 Capsicum annuum HOM05D011855 ORTHO05D011609 2.7e-46 189.9 285 45.3
Nitab4.5_0000422g0050 Nicotiana tabacum HOM05D011855 ORTHO05D011609 3.8e-32 142.9 141 58.9
Potri.019G084400 Populus trichocarpa HOM05D012719 ORTHO05D011609 8.5e-24 115.2 304 31.9
Potri.013G113800 Populus trichocarpa HOM05D012719 ORTHO05D011609 6.8e-21 105.5 302 28.8
Haze_17923 Corylus avellana HOM05D012719 ORTHO05D011609 5.7e-20 102.4 304 29.3
Thecc.08G181900 Theobroma cacao HOM05D011855 ORTHO05D011609 9.8e-20 101.7 303 29.7
Cfa018193 Carpinus fangiana HOM05D012719 ORTHO05D011609 2.8e-19 100.1 305 29.5
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 3.7e-19 99.8 306 27.8
Dinv41697 Davidia involucrata HOM05D011855 ORTHO05D011609 3.7e-19 99.8 206 33.5
Nn5g27743 Nelumbo nucifera HOM05D011855 ORTHO05D011609 3.7e-19 99.8 295 27.8
Ah.05g178050 Amaranthus hybridus HOM05D012719 ORTHO05D011609 2.4e-18 97.1 295 27.1
Sc01g0001740 Simmondsia chinensis HOM05D011855 ORTHO05D011609 2.4e-18 97.1 305 29.8
Cc10_g11370 Coffea canephora HOM05D011855 ORTHO05D011609 7.0e-18 95.5 256 32.0
AUR62004652 Chenopodium quinoa HOM05D012719 ORTHO05D011609 4.2e-15 86.3 300 27.3
COL.COLO4_19764 Corchorus olitorius HOM05D012719 ORTHO05D011609 9.5e-15 85.1 303 27.1
Peaxi162Scf00310g00618 Petunia axillaris HOM05D011855 ORTHO05D011609 2.1e-14 84.0 95 50.5
AUR62023571 Chenopodium quinoa HOM05D012719 ORTHO05D011609 4.7e-14 82.8 302 26.2
ATR0152G020 Amborella trichopoda HOM05D011855 ORTHO05D011609 1.5e-12 77.8 292 26.4
Cpa.g.sc66.50 Carica papaya HOM05D011855 ORTHO05D011609 3.4e-12 76.6 302 27.5
HPP92_016119 Vanilla planifolia HOM05D012719 ORTHO05D011609 4.1e-10 69.7 295 23.4
HPP92_011411 Vanilla planifolia HOM05D012719 ORTHO05D011609 5.4e-10 69.3 280 24.3
TWI59G0213 Tripterygium wilfordii HOM05D002421 ORTHO05D002560 6.6e-08 62.4 314 24.8
ECA240G4074 Erigeron canadensis HOM05D002421 ORTHO05D002560 1.1e-07 61.6 309 22.7
Gohir.A06G040100 Gossypium hirsutum HOM05D002421 ORTHO05D002560 3.3e-07 60.1 307 25.7
Gohir.D06G041100 Gossypium hirsutum HOM05D002421 ORTHO05D002560 7.3e-07 58.9 307 25.4
Glyma.08G127100 Glycine max HOM05D002421 ORTHO05D002560 1.2e-06 58.2 305 23.0
Gorai.010G045900 Gossypium raimondii HOM05D002421 ORTHO05D002560 1.6e-06 57.8 307 25.4
TWI23G0611 Tripterygium wilfordii HOM05D002421 ORTHO05D002560 1.6e-06 57.8 312 23.4
Actinidia00201 Actinidia chinensis HOM05D002421 ORTHO05D002560 2.1e-06 57.4 314 23.2
Oeu000110.1 Olea europaea HOM05D002421 ORTHO05D002560 2.1e-06 57.4 318 24.2
PSO017G4470 Papaver somniferum HOM05D002421 ORTHO05D002560 3.6e-06 56.6 309 23.6
Lalb_Chr20g0123561 Lupinus albus HOM05D002421 ORTHO05D002560 4.7e-06 56.2 305 22.6
VMungo0251G2838 Vigna mungo HOM05D002421 ORTHO05D002560 4.7e-06 56.2 305 23.0
DCAR_025346 Daucus carota HOM05D002421 ORTHO05D002560 6.1e-06 55.8 316 23.4
HanXRQChr03g0065211 Helianthus annuus HOM05D002421 ORTHO05D002560 6.1e-06 55.8 311 21.2
PSO170G1813 Papaver somniferum HOM05D002421 ORTHO05D002560 6.1e-06 55.8 309 23.6
Lsat_1_v5_gn_9_121101 Lactuca sativa HOM05D002421 ORTHO05D002560 8.0e-06 55.5 309 22.7
vmacro00783 Vaccinium macrocarpon HOM05D002421 ORTHO05D002560 8.0e-06 55.5 318 20.4


User provided reference genes

Program Settings