Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 1.5e-75 286.2 155 100.0
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 7.8e-72 273.9 155 92.9
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 8.3e-66 253.8 155 87.7
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 2.6e-43 179.1 191 62.3
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.2e-40 170.2 174 60.9
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 6.6e-39 164.5 179 61.5
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 5.0e-18 95.1 151 45.7
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 1.2e-16 90.5 142 47.2
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 8.7e-15 84.3 160 42.5
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 9.7e-14 80.9 162 36.4
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 1.6e-13 80.1 151 39.1
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 1.4e-12 77.0 155 43.9
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 3.1e-12 75.9 152 36.2
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 9.0e-12 74.3 162 37.7
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 1.0e-10 70.9 155 38.7
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 2.2e-10 69.7 155 37.4
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 6.5e-10 68.2 163 35.6
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 1.4e-09 67.0 168 34.5
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 1.9e-09 66.6 156 31.4
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 4.2e-09 65.5 164 29.9
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 4.2e-09 65.5 164 29.9
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 5.5e-09 65.1 177 35.6
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 7.2e-09 64.7 157 34.4
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 1.6e-08 63.5 159 34.0
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.1e-08 63.2 153 30.7
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.7e-08 62.8 173 36.4
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 3.6e-08 62.4 159 37.1
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 3.6e-08 62.4 154 29.2
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 3.6e-08 62.4 155 31.6
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 4.6e-08 62.0 155 32.9
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 6.1e-08 61.6 170 34.1
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 7.9e-08 61.2 157 31.8
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 2.3e-07 59.7 155 34.2
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 3.0e-07 59.3 151 33.1
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 8.8e-07 57.8 176 29.5
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.1e-06 57.4 155 29.0
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 1.5e-06 57.0 168 36.9
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.5e-06 57.0 158 35.4
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 3.3e-06 55.8 150 28.7
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 3.3e-06 55.8 102 38.2
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 4.3e-06 55.5 155 32.9
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 4.3e-06 55.5 164 34.8
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 4.3e-06 55.5 163 33.7
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 5.7e-06 55.1 170 32.9
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 7.4e-06 54.7 154 31.8
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 9.7e-06 54.3 153 32.7


User provided reference genes

Program Settings