Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 5.4e-50 200.7 100 100.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 2.1e-49 198.7 100 99.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.7e-48 195.7 100 97.0
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 6.2e-46 187.2 100 93.0
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.4e-45 186.0 100 92.0
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 2.5e-39 165.2 91 89.0
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 7.6e-36 153.7 100 77.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.2e-35 152.1 101 75.2
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 6.4e-35 150.6 100 74.0
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 8.4e-35 150.2 100 76.0
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.4e-34 149.4 100 77.0
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 4.2e-34 147.9 102 79.4
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 4.2e-34 147.9 101 78.2
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 5.4e-34 147.5 100 72.0
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 7.1e-34 147.1 102 74.5
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.2e-33 146.4 101 77.2
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.2e-33 146.4 102 78.4
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.6e-33 146.0 103 73.8
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 76.5
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 76.5
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 76.5
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 76.5
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 4.6e-33 144.4 96 78.1
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 4.6e-33 144.4 101 75.2
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 6.0e-33 144.1 99 76.8
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 7.8e-33 143.7 100 74.0
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 1.3e-32 142.9 101 72.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 1.3e-32 142.9 100 72.0
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.3e-32 142.9 103 70.9
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.7e-32 142.5 102 75.5
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 2.3e-32 142.1 103 71.8
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 3.0e-32 141.7 98 72.4
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 3.0e-32 141.7 102 72.5
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 6.6e-32 140.6 102 76.5
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 6.6e-32 140.6 102 74.5
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 6.6e-32 140.6 100 74.0
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.1e-31 139.8 100 71.0
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.5e-31 139.4 101 70.3
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.9e-31 139.0 102 71.6
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 3.3e-31 138.3 100 73.0
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 5.6e-31 137.5 101 72.3
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 2.8e-30 135.2 101 75.2
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 4.8e-30 134.4 93 71.0
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 8.1e-30 133.7 101 70.3
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.1e-29 133.3 101 73.3
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 2.4e-29 132.1 101 73.3
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 3.1e-29 131.7 101 71.3
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 1.2e-28 129.8 102 71.6
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 2.0e-28 129.0 98 70.4
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 4.4e-28 127.9 98 69.4
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 7.6e-28 127.1 91 71.4
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 9.9e-28 126.7 98 68.4
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.3e-27 126.3 100 66.0
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-27 125.9 94 69.1
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 2.2e-27 125.6 99 65.7
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 2.2e-27 125.6 103 66.0
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 3.8e-27 124.8 103 67.0
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 4.9e-27 124.4 100 70.0
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 6.4e-27 124.0 103 66.0
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.1e-26 123.2 101 69.3
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 1.9e-26 122.5 97 66.0
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 2.4e-26 122.1 104 63.5
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 2.4e-26 122.1 99 64.6
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 4.2e-26 121.3 94 68.1
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 7.1e-26 120.6 101 66.3
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 9.3e-26 120.2 104 62.5
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.6e-25 119.4 99 65.7
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.6e-25 119.4 104 62.5
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 2.1e-25 119.0 99 65.7
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 3.5e-25 118.2 105 60.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.0e-24 116.7 103 62.1
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-24 115.9 94 66.0
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.7e-24 115.9 103 62.1
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.7e-24 115.9 103 62.1
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 2.3e-24 115.5 97 67.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 3.0e-24 115.2 100 66.0
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 8.7e-24 113.6 96 65.6
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.1e-23 113.2 104 60.6
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.5e-23 112.8 104 60.6
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.5e-23 112.8 104 60.6
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.9e-23 112.5 104 60.6
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.9e-23 112.5 96 66.7
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 4.0e-21 104.8 100 56.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 6.9e-21 104.0 102 54.9
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 5.8e-20 100.9 103 57.3
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 5.8e-20 100.9 103 57.3
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.7e-19 99.4 104 58.7
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.2e-19 99.0 100 59.0
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 6.4e-19 97.4 83 62.7
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.4e-18 96.3 99 54.5
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 3.2e-18 95.1 112 55.4
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 3.2e-18 95.1 104 56.7
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 4.6e-17 91.3 89 59.6
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 5.1e-16 87.8 80 66.2
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 6.7e-16 87.4 63 71.4
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 1.3e-14 83.2 93 52.7
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 2.1e-14 82.4 75 62.7
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 2.8e-14 82.0 87 51.7
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 4.2e-10 68.2 105 45.7
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.3e-06 56.6 61 50.8
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 8.2e-06 53.9 105 35.2


User provided reference genes

Program Settings