Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 2.1e-100 369.0 184 100.0
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 6.8e-99 364.0 184 98.4
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 4.6e-87 324.7 195 87.2
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 2.1e-47 193.0 195 56.9
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.2e-41 172.9 181 58.0
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 1.1e-32 144.1 200 47.0
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 2.3e-30 136.3 208 45.2
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 5.1e-30 135.2 203 44.3
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 6.7e-30 134.8 193 47.7
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.7e-30 134.4 212 45.3
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.1e-29 134.0 211 42.7
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 7.4e-29 131.3 208 43.3
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.6e-28 130.2 208 45.7
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.6e-28 130.2 189 42.9
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.6e-28 130.2 189 42.9
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 2.2e-28 129.8 213 44.1
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 2.2e-28 129.8 201 49.8
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.7e-28 129.0 210 43.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 4.8e-28 128.6 220 44.5
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.4e-27 126.3 210 43.3
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 5.3e-27 125.2 212 43.9
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 9.0e-27 124.4 211 44.5
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.0e-26 123.2 218 42.2
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.6e-26 122.9 227 41.0
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 5.9e-26 121.7 222 40.5
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.0e-25 120.9 216 39.4
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.7e-25 120.2 210 42.4
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.8e-25 119.0 212 41.0
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 3.8e-25 119.0 212 41.0
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 5.0e-25 118.6 204 41.2
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 6.5e-25 118.2 217 40.6
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 6.5e-25 118.2 180 45.0
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 6.5e-25 118.2 221 39.4
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 8.5e-25 117.9 201 41.8
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 8.5e-25 117.9 201 41.8
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 8.5e-25 117.9 220 40.0
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.1e-24 117.5 178 47.8
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 1.4e-24 117.1 184 44.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.9e-24 116.7 202 41.6
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 3.2e-24 115.9 220 39.1
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 3.2e-24 115.9 222 37.4
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 9.4e-24 114.4 226 37.6
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.6e-23 113.6 161 49.7
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 2.1e-23 113.2 213 39.4
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.1e-23 113.2 227 39.2
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 2.1e-23 113.2 211 40.8
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.6e-23 112.1 197 41.6
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.0e-22 110.9 202 42.1
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.0e-22 110.9 198 42.9
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 3.0e-22 109.4 147 44.9
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.8e-22 107.8 192 37.5
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 8.8e-22 107.8 197 42.6
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.1e-21 107.5 162 48.8
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.5e-21 107.1 227 38.8
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.0e-21 106.7 207 39.1
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 2.5e-21 106.3 226 38.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.3e-21 105.9 175 41.1
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 4.3e-21 105.5 227 37.9
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.3e-21 105.5 226 38.1
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 7.4e-21 104.8 181 44.8
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 7.4e-21 104.8 179 45.3
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 9.7e-21 104.4 196 36.7
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.3e-20 104.0 187 39.6
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.2e-20 103.2 177 44.1
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 2.8e-20 102.8 184 44.6
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 8.2e-20 101.3 208 35.1
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.1e-19 100.9 202 39.1
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 1.1e-19 100.9 174 42.5
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.4e-19 100.5 190 37.9
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.4e-19 100.5 116 50.9
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.4e-19 99.8 222 36.5
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 2.4e-19 99.8 225 40.0
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 3.1e-19 99.4 185 38.4
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 3.1e-19 99.4 208 37.0
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 5.3e-19 98.6 217 36.9
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.3e-19 98.6 212 37.3
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 5.3e-19 98.6 205 38.0
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 6.9e-19 98.2 200 37.5
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 1.5e-18 97.1 243 36.2
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 2.6e-18 96.3 235 37.0
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 2.6e-18 96.3 236 35.2
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 1.0e-17 94.4 191 38.2
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 1.0e-17 94.4 191 38.2
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 1.3e-17 94.0 168 44.0
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.9e-17 92.8 156 43.6
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 8.5e-17 91.3 275 30.9
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 8.5e-17 91.3 240 32.5
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-16 90.9 167 37.1
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.9e-16 90.1 186 37.6
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 7.2e-16 88.2 184 40.2
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 7.2e-16 88.2 137 44.5
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.4e-14 84.0 247 32.8
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 3.0e-14 82.8 180 34.4
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 6.7e-14 81.6 156 35.9
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.3e-13 79.3 192 34.9
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.3e-13 79.3 192 34.9
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 9.7e-13 77.8 111 48.6
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 3.7e-12 75.9 270 31.1
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 3.7e-12 75.9 201 33.3
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 8.2e-12 74.7 230 31.7
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 7.0e-11 71.6 163 35.6
DCAR_031230 Daucus carota HOM05D007182 ORTHO05D008919 2.0e-10 70.1 160 33.1
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 2.6e-10 69.7 226 29.2
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 1.0e-09 67.8 148 37.8
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 2.5e-08 63.2 177 31.1
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 4.2e-08 62.4 161 31.1
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 5.5e-08 62.0 194 32.0
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 2.1e-07 60.1 64 50.0
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 2.1e-07 60.1 130 37.7
MBI03_g11135_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 6.7e-06 55.1 114 36.8


User provided reference genes

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