Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 1.1e-72 276.6 144 100.0
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 2.5e-72 275.4 144 99.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 1.2e-69 266.5 145 97.2
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 1.1e-56 223.4 146 85.6
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 8.6e-49 197.2 120 85.0
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 4.3e-48 194.9 118 84.7
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 1.5e-45 186.4 123 74.0
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 7.5e-45 184.1 147 63.9
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 4.9e-44 181.4 122 73.0
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 1.1e-43 180.3 136 69.9
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.4e-43 179.9 146 67.1
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 1.9e-43 179.5 123 71.5
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 3.2e-43 178.7 112 75.9
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 7.0e-43 177.6 123 70.7
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 1.2e-42 176.8 116 75.0
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 2.1e-42 176.0 150 60.0
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 4.6e-42 174.9 145 64.1
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.6e-42 174.9 113 72.6
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 7.8e-42 174.1 137 63.5
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.0e-41 173.7 127 67.7
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 1.0e-41 173.7 116 73.3
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 1.3e-41 173.3 146 61.0
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.3e-41 173.3 137 63.5
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 1.3e-41 173.3 120 70.8
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 1.7e-41 172.9 122 69.7
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 2.3e-41 172.6 144 65.3
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 6.6e-41 171.0 118 70.3
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 8.6e-41 170.6 125 68.8
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.9e-40 169.5 146 64.4
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 4.3e-40 168.3 119 72.3
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 4.3e-40 168.3 121 69.4
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 7.3e-40 167.5 122 67.2
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 7.3e-40 167.5 124 66.9
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 9.5e-40 167.2 144 65.3
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 9.5e-40 167.2 114 71.9
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 2.1e-39 166.0 119 71.4
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 2.1e-39 166.0 105 75.2
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 2.8e-39 165.6 110 74.5
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 3.6e-39 165.2 142 60.6
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 3.6e-39 165.2 142 60.6
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 8.1e-39 164.1 114 72.8
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 8.1e-39 164.1 95 81.1
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.4e-38 163.3 112 72.3
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 3.1e-38 162.2 143 62.2
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 4.0e-38 161.8 96 81.2
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 5.2e-38 161.4 145 60.0
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 6.8e-38 161.0 127 65.4
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 6.8e-38 161.0 119 69.7
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 3.4e-37 158.7 142 56.3
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 4.4e-37 158.3 153 58.8
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 4.4e-37 158.3 96 78.1
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 4.4e-37 158.3 96 78.1
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 7.5e-37 157.5 147 60.5
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 2.2e-36 156.0 143 59.4
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.9e-36 155.6 114 66.7
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 3.7e-36 155.2 112 67.9
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 3.7e-36 155.2 95 80.0
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 4.9e-36 154.8 133 60.9
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 1.1e-35 153.7 144 59.0
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 1.1e-35 153.7 97 75.3
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 1.1e-35 153.7 143 58.0
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 1.4e-35 153.3 114 65.8
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 1.9e-35 152.9 105 73.3
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 3.2e-35 152.1 96 75.0
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 4.1e-35 151.8 112 67.0
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 4.1e-35 151.8 112 67.0
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 7.1e-35 151.0 108 68.5
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 9.2e-35 150.6 97 75.3
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 9.2e-35 150.6 148 56.1
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 1.6e-34 149.8 106 68.9
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 2.7e-34 149.1 145 59.3
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 6.0e-34 147.9 106 67.9
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 7.8e-34 147.5 93 74.2
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 1.0e-33 147.1 125 59.2
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 1.3e-33 146.7 98 69.4
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 2.3e-33 146.0 107 71.0
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 1.5e-32 143.3 106 66.0
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 1.9e-32 142.9 102 66.7
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 9.5e-32 140.6 124 57.3
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.6e-31 139.8 90 71.1
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 8.1e-31 137.5 120 58.3
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 1.1e-30 137.1 98 67.3
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.4e-30 136.7 95 67.4
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 2.4e-30 136.0 125 58.4
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 3.1e-30 135.6 116 63.8
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 8.9e-30 134.0 70 88.6
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 8.9e-30 134.0 94 71.3
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 1.5e-29 133.3 92 64.1
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.4e-29 131.7 126 57.1
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 7.6e-29 131.0 119 58.8
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 1.3e-28 130.2 95 63.2
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 1.1e-27 127.1 79 74.7
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 4.1e-27 125.2 71 81.7
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 1.6e-26 123.2 84 71.4
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 2.1e-26 122.9 73 79.5
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 5.1e-25 118.2 117 53.0
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 1.9e-24 116.3 95 54.7
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 5.6e-24 114.8 93 57.0
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.2e-23 113.6 73 69.9
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 2.4e-22 109.4 63 76.2
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 1.1e-19 100.5 119 53.8
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.2e-18 97.1 70 64.3
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 3.6e-15 85.5 76 57.9
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 5.3e-14 81.6 54 68.5
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 1.1e-11 73.9 101 39.6
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 2.4e-11 72.8 82 51.2
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 5.4e-11 71.6 42 73.8


User provided reference genes

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