Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 2.6e-59 231.9 120 100.0
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.3e-58 229.6 120 99.2
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 8.2e-53 210.3 120 90.0
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 4.5e-43 177.9 120 75.0
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 7.7e-43 177.2 120 72.5
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 5.7e-38 161.0 102 76.5
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 1.2e-27 126.7 122 58.2
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 1.0e-26 123.6 120 54.2
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 2.9e-26 122.1 121 56.2
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 1.1e-25 120.2 120 55.8
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 1.9e-25 119.4 120 55.0
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 2.5e-25 119.0 120 55.0
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 4.2e-25 118.2 119 51.3
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 5.5e-25 117.9 120 50.8
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 5.5e-25 117.9 120 50.0
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 9.4e-25 117.1 120 50.0
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 1.2e-24 116.7 121 51.2
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.2e-24 116.7 120 53.3
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.1e-24 115.9 121 56.2
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 2.7e-24 115.5 120 52.5
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 3.6e-24 115.2 117 50.4
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 4.7e-24 114.8 120 51.7
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 4.7e-24 114.8 121 53.7
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 4.7e-24 114.8 93 55.9
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 1.0e-23 113.6 120 50.8
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 1.4e-23 113.2 122 51.6
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 5.2e-23 111.3 121 52.9
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 8.8e-23 110.5 119 45.4
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 3.3e-22 108.6 102 52.0
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 3.3e-22 108.6 121 51.2
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 4.4e-22 108.2 122 52.5
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 5.7e-22 107.8 121 50.4
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 5.7e-22 107.8 120 48.3
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 7.5e-22 107.5 102 52.9
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 2.8e-21 105.5 115 42.6
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 4.8e-21 104.8 99 52.5
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 4.8e-21 104.8 120 49.2
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 6.3e-21 104.4 99 53.5
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 6.3e-21 104.4 111 49.5
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 6.3e-21 104.4 99 55.6
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 8.3e-21 104.0 120 46.7
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 1.1e-20 103.6 105 54.3
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 1.1e-20 103.6 97 49.5
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 1.4e-20 103.2 112 43.8
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 1.8e-20 102.8 101 52.5
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 1.8e-20 102.8 120 43.3
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 2.4e-20 102.4 122 48.4
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 3.1e-20 102.1 91 54.9
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 5.3e-20 101.3 114 45.6
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 9.1e-20 100.5 121 49.6
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 9.1e-20 100.5 120 46.7
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 9.1e-20 100.5 95 54.7
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 1.2e-19 100.1 112 47.3
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 1.2e-19 100.1 112 47.3
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 1.2e-19 100.1 121 43.8
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 1.2e-19 100.1 94 54.3
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 1.6e-19 99.8 120 41.7
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 1.6e-19 99.8 95 52.6
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.0e-19 99.4 111 51.4
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 2.7e-19 99.0 105 51.4
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 2.7e-19 99.0 111 49.5
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 3.5e-19 98.6 105 53.3
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 3.5e-19 98.6 105 53.3
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 7.7e-19 97.4 111 49.5
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 2.2e-18 95.9 111 48.6
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 2.2e-18 95.9 93 46.2
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 3.8e-18 95.1 105 43.8
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 3.8e-18 95.1 95 54.7
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 6.5e-18 94.4 101 50.5
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 6.5e-18 94.4 101 50.5
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 6.5e-18 94.4 100 51.0
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 8.5e-18 94.0 101 50.5
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 8.5e-18 94.0 94 52.1
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 1.5e-17 93.2 102 52.0
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 1.5e-17 93.2 100 48.0
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 1.9e-17 92.8 115 43.5
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 1.9e-17 92.8 63 76.2
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.9e-17 92.8 86 52.3
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 7.2e-17 90.9 113 46.9
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 9.4e-17 90.5 102 50.0
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 9.4e-17 90.5 102 50.0
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 9.4e-17 90.5 102 49.0
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 9.4e-17 90.5 100 48.0
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 2.1e-16 89.4 103 49.5
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 2.1e-16 89.4 112 47.3
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 2.7e-16 89.0 118 45.8
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 6.1e-16 87.8 102 49.0
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 1.8e-15 86.3 90 46.7
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 6.8e-15 84.3 96 49.0
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 8.8e-15 84.0 113 41.6
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.2e-14 83.6 97 45.4
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.2e-14 83.6 97 46.4
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 4.4e-14 81.6 97 45.4
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 4.4e-14 81.6 97 45.4
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 2.2e-13 79.3 109 42.2
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 2.8e-13 79.0 79 48.1
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 8.3e-13 77.4 74 54.1
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 1.2e-11 73.6 91 39.6
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 2.0e-11 72.8 97 43.3
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 2.3e-10 69.3 95 41.1
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 3.3e-09 65.5 74 44.6
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 3.3e-09 65.5 74 44.6
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 8.0e-08 60.8 89 42.7
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 4.4e-06 55.1 63 49.2
Lsat_1_v5_gn_4_16480 Lactuca sativa HOM05D007246 ORTHO05D009066 5.7e-06 54.7 36 61.1
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 9.8e-06 53.9 66 40.9


User provided reference genes

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