Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 4.4e-112 407.9 198 100.0
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 4.4e-112 407.9 198 100.0
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 3.2e-110 401.7 198 98.5
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 3.0e-108 395.2 198 95.5
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 6.8e-105 384.0 198 91.9
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.7e-100 369.4 198 86.9
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.1e-99 366.7 198 85.4
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 2.5e-99 365.5 198 86.9
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.5e-99 365.5 198 86.9
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 4.3e-99 364.8 198 85.9
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 5.6e-99 364.4 198 84.8
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 5.6e-99 364.4 198 84.8
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 5.6e-99 364.4 198 85.9
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.2e-98 363.2 180 95.0
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 3.6e-98 361.7 198 85.4
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 6.2e-98 360.9 198 83.8
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.8e-97 359.4 198 84.3
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 8.9e-97 357.1 198 82.8
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 8.9e-97 357.1 198 82.8
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 8.9e-97 357.1 198 83.3
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.2e-96 356.7 198 82.8
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 2.6e-96 355.5 198 83.8
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 9.9e-96 353.6 199 84.9
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 9.9e-96 353.6 197 81.7
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 9.9e-96 353.6 197 81.7
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 9.9e-96 353.6 198 83.3
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.3e-95 353.2 198 82.3
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.3e-95 353.2 198 81.8
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 2.2e-95 352.4 198 81.8
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 2.2e-95 352.4 198 81.8
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.2e-95 352.4 198 82.3
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 2.9e-95 352.1 199 82.4
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 3.7e-95 351.7 198 80.8
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 6.4e-95 350.9 198 81.3
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 6.4e-95 350.9 198 82.3
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 8.4e-95 350.5 198 80.3
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.1e-94 350.1 198 81.3
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.4e-94 349.7 198 82.3
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.4e-94 349.7 199 81.9
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.4e-94 349.7 199 81.9
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.9e-94 349.4 211 79.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 2.4e-94 349.0 198 80.3
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 2.4e-94 349.0 196 82.7
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 3.2e-94 348.6 198 80.8
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 4.1e-94 348.2 198 81.3
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 5.4e-94 347.8 198 81.3
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.1e-94 347.4 199 81.4
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.1e-94 347.4 199 80.9
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 1.2e-93 346.7 198 81.3
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.6e-93 346.3 198 82.8
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 4.6e-93 344.7 198 79.3
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 6.0e-93 344.4 198 81.3
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 6.0e-93 344.4 199 80.9
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 7.8e-93 344.0 198 80.3
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.0e-92 343.6 198 81.8
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.0e-92 343.6 198 79.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.3e-92 343.2 198 79.8
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.3e-92 342.4 196 80.6
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.3e-92 342.4 196 80.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 3.0e-92 342.0 198 78.8
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 6.6e-92 340.9 198 79.8
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 8.6e-92 340.5 198 78.3
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.1e-91 340.1 198 81.3
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.5e-91 339.7 200 79.5
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 4.3e-91 338.2 200 79.0
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 7.3e-91 337.4 200 79.5
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.6e-90 336.3 200 78.5
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.8e-90 335.5 199 78.4
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 4.7e-90 334.7 200 78.5
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 8.1e-90 334.0 200 79.5
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 8.1e-90 334.0 198 76.8
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.4e-89 333.2 198 77.8
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 2.4e-89 332.4 200 78.0
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 3.1e-89 332.0 200 78.5
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 3.1e-89 332.0 200 78.5
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.2e-88 330.1 198 75.3
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 2.9e-87 325.5 188 80.3
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 4.9e-87 324.7 198 75.8
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 6.4e-87 324.3 216 73.1
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 6.4e-87 324.3 216 73.1
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 6.4e-87 324.3 198 76.3
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 1.9e-86 322.8 196 76.5
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 4.2e-86 321.6 213 73.2
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 5.4e-86 321.2 178 82.0
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 7.1e-86 320.9 198 76.8
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 7.1e-86 320.9 195 74.9
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 6.0e-85 317.8 206 73.3
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 6.0e-85 317.8 182 86.3
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.0e-84 317.0 198 76.3
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.4e-81 306.6 201 73.1
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.5e-80 303.1 198 70.7
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 2.0e-80 302.8 198 72.7
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.4e-80 301.6 198 70.2
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 5.8e-80 301.2 198 72.2
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.7e-76 289.7 198 67.7
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 5.1e-76 288.1 198 72.7
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 8.7e-76 287.3 199 68.8
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.5e-75 285.8 198 66.7
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.5e-72 275.0 198 69.2
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 3.5e-69 265.4 198 60.6
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 3.0e-68 262.3 199 62.8
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.3e-66 256.9 186 69.4
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.8e-65 253.1 198 64.6
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 6.5e-63 244.6 144 81.2
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.1e-59 233.8 146 76.0
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 3.4e-56 222.2 132 79.5
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.3e-52 210.3 210 51.9
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 6.3e-50 201.4 109 80.7
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-31 139.8 111 64.9
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 2.9e-31 139.4 133 57.1
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.0e-28 131.0 78 80.8
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 9.7e-27 124.4 204 40.2
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.4e-25 120.6 237 34.2
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 2.0e-24 116.7 143 43.4
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 5.7e-19 98.6 58 75.9
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 3.6e-13 79.3 38 81.6
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 3.4e-11 72.8 62 61.3
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.6e-08 63.9 36 72.2
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 9.5e-06 54.7 39 69.2


User provided reference genes

Program Settings