Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.4e-93 346.3 179 100.0
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 6.0e-92 340.9 179 98.3
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 9.9e-87 323.6 179 93.9
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.8e-73 278.9 185 82.7
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.5e-71 273.1 187 75.4
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.9e-45 186.4 183 55.7
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 2.7e-44 182.6 194 55.2
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.4e-43 180.3 176 56.8
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 2.0e-42 176.4 142 62.0
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 3.7e-41 172.2 180 54.4
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 4.8e-41 171.8 118 70.3
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 1.8e-40 169.9 109 76.1
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 4.1e-40 168.7 199 52.3
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 4.1e-40 168.7 150 60.0
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 5.3e-40 168.3 184 53.3
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 6.9e-40 167.9 136 66.9
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.2e-39 167.2 159 56.6
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.0e-39 166.4 109 72.5
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.0e-39 166.4 109 73.4
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 4.5e-39 165.2 143 59.4
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 5.9e-39 164.9 104 81.7
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 5.9e-39 164.9 158 54.4
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 5.9e-39 164.9 172 53.5
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 5.9e-39 164.9 170 52.4
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 5.9e-39 164.9 141 59.6
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 7.7e-39 164.5 168 57.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.0e-38 164.1 200 49.5
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.0e-38 164.1 200 49.5
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.0e-38 164.1 123 65.9
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.0e-38 164.1 192 52.6
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.3e-38 163.7 192 52.6
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 2.9e-38 162.5 165 54.5
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 2.9e-38 162.5 180 48.3
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 3.8e-38 162.2 186 46.2
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.8e-38 162.2 109 70.6
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 6.5e-38 161.4 167 52.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.5e-37 159.5 165 52.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 3.2e-37 159.1 175 52.6
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 5.5e-37 158.3 113 68.1
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 7.2e-37 157.9 171 50.9
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 9.4e-37 157.5 107 72.0
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 1.2e-36 157.1 163 52.1
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 1.6e-36 156.8 146 56.2
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.6e-36 156.8 132 60.6
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.6e-36 156.8 109 69.7
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.1e-36 156.4 105 74.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 2.7e-36 156.0 105 74.3
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 2.7e-36 156.0 110 67.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 6.1e-36 154.8 110 66.4
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 6.1e-36 154.8 109 69.7
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 7.9e-36 154.5 105 73.3
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.4e-35 153.7 190 48.4
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.4e-35 153.7 132 62.9
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.8e-35 153.3 123 64.2
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.8e-35 153.3 123 64.2
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.8e-35 153.3 109 65.1
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.8e-35 153.3 178 50.0
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 3.0e-35 152.5 123 63.4
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 3.0e-35 152.5 109 70.6
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 3.0e-35 152.5 109 70.6
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 3.0e-35 152.5 109 70.6
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 3.0e-35 152.5 118 63.6
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 3.0e-35 152.5 130 59.2
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 3.9e-35 152.1 123 63.4
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 3.9e-35 152.1 101 72.3
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 5.1e-35 151.8 161 53.4
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 5.1e-35 151.8 153 50.3
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.1e-34 150.6 95 74.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.1e-34 150.6 174 50.0
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.5e-34 150.2 181 50.8
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.5e-34 150.2 110 67.3
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.5e-34 150.2 110 67.3
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.5e-34 150.2 112 66.1
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.0e-34 149.8 190 46.8
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 3.3e-34 149.1 111 65.8
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 7.4e-34 147.9 154 51.3
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 9.7e-34 147.5 112 63.4
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 1.3e-33 147.1 170 45.9
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.7e-33 146.7 185 47.6
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 2.2e-33 146.4 109 64.2
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.8e-33 146.0 105 63.8
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 3.7e-33 145.6 186 47.8
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.7e-33 145.6 95 73.7
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 4.8e-33 145.2 156 50.0
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 9.1e-32 141.0 177 44.1
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.0e-31 139.8 107 69.2
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 2.6e-31 139.4 112 61.6
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 7.7e-31 137.9 102 68.6
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 3.6e-28 129.0 112 60.7
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.8e-27 126.7 105 61.9
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 3.9e-27 125.6 109 58.7
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 5.2e-27 125.2 102 59.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.5e-26 123.6 86 72.1
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 2.0e-26 123.2 102 58.8
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 3.5e-23 112.5 126 45.2
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 6.5e-22 108.2 87 63.2
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.5e-21 106.3 101 55.4
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 3.2e-21 105.9 82 52.4
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 2.1e-20 103.2 137 44.5
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 8.0e-20 101.3 76 60.5
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 3.0e-19 99.4 107 46.7
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.0e-18 96.7 132 45.5
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 5.7e-18 95.1 62 71.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 4.8e-17 92.0 90 48.9
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.7e-09 65.9 44 70.5
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 2.4e-08 63.2 99 39.4
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 7.7e-07 58.2 102 40.2


User provided reference genes

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