Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g007080 Solanum pennellii HOM05D007829 ORTHO05D009903 2.7e-146 521.9 257 100.0
PGSC0003DMG400013350 Solanum tuberosum HOM05D007829 ORTHO05D009903 5.0e-116 421.4 210 95.2
Solyc11g012300.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 2.6e-80 302.8 257 66.1
Actinidia39272 Actinidia chinensis HOM05D007829 ORTHO05D009903 2.1e-42 176.8 141 56.7
Potri.016G013200 Populus trichocarpa HOM05D007829 ORTHO05D009903 1.1e-41 174.5 142 58.5
Manes.08G071000 Manihot esculenta HOM05D007829 ORTHO05D009903 3.4e-40 169.5 144 53.5
Rhsim02G0099400 Rhododendron simsii HOM05D007829 ORTHO05D009903 7.6e-40 168.3 141 52.5
MD10G1332100 Malus domestica HOM05D007829 ORTHO05D009903 1.0e-39 167.9 165 49.7
Prupe.4G010000 Prunus persica HOM05D007829 ORTHO05D009903 1.7e-39 167.2 150 53.3
Hma1.2p1_0657F.1_g197120 Hydrangea macrophylla HOM05D007829 ORTHO05D009903 2.9e-39 166.4 142 53.5
Peaxi162Scf00352g00215 Petunia axillaris HOM05D007829 ORTHO05D009903 4.9e-39 165.6 110 70.0
CSS0014217 Camellia sinensis var. sinensis HOM05D007829 ORTHO05D009903 6.5e-39 165.2 141 53.2
Dinv07407 Davidia involucrata HOM05D007829 ORTHO05D009903 6.5e-39 165.2 152 52.0
PSO675G8147 Papaver somniferum HOM05D007829 ORTHO05D009903 4.2e-38 162.5 144 53.5
Sabra16G0002200 Salix brachista HOM05D007829 ORTHO05D009903 4.2e-38 162.5 153 53.6
CiPaw.10G078200 Carya illinoinensis HOM05D007829 ORTHO05D009903 9.3e-38 161.4 137 55.5
PSO541G5076 Papaver somniferum HOM05D007829 ORTHO05D009903 1.6e-37 160.6 144 53.5
Cc00_g34400 Coffea canephora HOM05D007829 ORTHO05D009903 2.7e-37 159.8 127 59.1
Thecc.06G233800 Theobroma cacao HOM05D007829 ORTHO05D009903 4.6e-37 159.1 137 54.0
Solyc11g012310.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 6.0e-37 158.7 89 91.0
Gohir.A10G009200 Gossypium hirsutum HOM05D007829 ORTHO05D009903 1.0e-36 157.9 137 53.3
Cpa.g.sc75.113 Carica papaya HOM05D007829 ORTHO05D009903 1.3e-36 157.5 142 52.1
Lj6g0010113 Lotus japonicus HOM05D007829 ORTHO05D009903 3.0e-36 156.4 142 49.3
Gohir.D10G008900 Gossypium hirsutum HOM05D007829 ORTHO05D009903 6.7e-36 155.2 137 53.3
Gorai.011G009700 Gossypium raimondii HOM05D007829 ORTHO05D009903 6.7e-36 155.2 137 53.3
Sabra16G0015800 Salix brachista HOM05D007829 ORTHO05D009903 8.7e-36 154.8 137 55.5
Sc05g0009620 Simmondsia chinensis HOM05D007829 ORTHO05D009903 1.5e-35 154.1 142 48.6
TWI38G1785 Tripterygium wilfordii HOM05D007829 ORTHO05D009903 2.5e-35 153.3 139 51.8
Aqoxy2G02687 Aquilegia oxysepala HOM05D007829 ORTHO05D009903 3.3e-35 152.9 141 48.2
Ciclev10018278m.g Citrus clementina HOM05D007829 ORTHO05D009903 3.3e-35 152.9 127 56.7
Migut.M01399 Erythranthe guttata HOM05D007829 ORTHO05D009903 4.3e-35 152.5 130 54.6
COL.COLO4_31889 Corchorus olitorius HOM05D007829 ORTHO05D009903 7.4e-35 151.8 138 54.3
Nn1g07397 Nelumbo nucifera HOM05D007829 ORTHO05D009903 6.3e-34 148.7 142 46.5
Psat1g175960 Pisum sativum HOM05D007829 ORTHO05D009903 1.8e-33 147.1 140 49.3
Medtr2g025760 Medicago truncatula HOM05D007829 ORTHO05D009903 2.4e-33 146.7 148 46.6
QL05p069622 Quercus lobata HOM05D007829 ORTHO05D009903 9.0e-33 144.8 149 49.7
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 1.5e-32 144.1 127 52.8
arahy.Tifrunner.gnm1.ann1.G424KC Arachis hypogaea HOM05D007829 ORTHO05D009903 2.6e-32 143.3 127 50.4
Eucgr.D01411 Eucalyptus grandis HOM05D007829 ORTHO05D009903 5.9e-32 142.1 136 50.0
TAR627G0564 Trochodendron aralioides HOM05D007829 ORTHO05D009903 1.0e-31 141.4 135 47.4
TAR627G1193 Trochodendron aralioides HOM05D007829 ORTHO05D009903 1.0e-31 141.4 135 47.4
SGA_v2.0_scaffold4G01872 Striga asiatica HOM05D007829 ORTHO05D009903 3.8e-31 139.4 153 45.8
CARHR229280 Cardamine hirsuta HOM05D007829 ORTHO05D009903 6.5e-31 138.7 135 48.9
FvH4_3g00940 Fragaria vesca HOM05D007829 ORTHO05D009903 5.5e-30 135.6 143 42.7
Duzib235G0645 Durio zibethinus HOM05D007829 ORTHO05D009903 2.1e-29 133.7 110 56.4
THA.LOC104813576 Tarenaya hassleriana HOM05D007829 ORTHO05D009903 3.6e-29 132.9 136 43.4
Oeu002768.1 Olea europaea HOM05D007829 ORTHO05D009903 4.6e-29 132.5 151 45.0
TPR.G13103 Trifolium pratense HOM05D007829 ORTHO05D009903 7.9e-29 131.7 131 47.3
FAN21G3309 Fragaria x ananassa HOM05D007829 ORTHO05D009903 3.9e-28 129.4 143 41.3
RcHm_v2.0_Chr5g0001461 Rosa chinensis HOM05D007829 ORTHO05D009903 3.9e-28 129.4 143 42.0
PGR004G1136 Punica granatum HOM05D007829 ORTHO05D009903 1.1e-27 127.9 149 40.9
TAR629G0037 Trochodendron aralioides HOM05D007829 ORTHO05D009903 3.3e-27 126.3 98 57.1
BraA01t01318Z Brassica rapa HOM05D007829 ORTHO05D009903 5.7e-27 125.6 135 43.7
A01p13730 Brassica napus HOM05D007829 ORTHO05D009903 9.7e-27 124.8 135 42.2
Glyma.15G114900 Glycine max HOM05D007829 ORTHO05D009903 9.7e-27 124.8 129 45.7
CANSAT56G1477 Cannabis sativa HOM05D007829 ORTHO05D009903 3.7e-26 122.9 146 44.5
AT4G22370 Arabidopsis thaliana HOM05D007829 ORTHO05D009903 6.3e-26 122.1 158 39.9
CDE11G1237 Ceratophyllum demersum HOM05D007829 ORTHO05D009903 6.3e-26 122.1 141 40.4
C01p16640 Brassica napus HOM05D007829 ORTHO05D009903 1.1e-25 121.3 135 42.2
BolC1t01611H Brassica oleracea HOM05D007829 ORTHO05D009903 1.1e-25 121.3 135 42.2
BcaC09g51100 Brassica carinata HOM05D007829 ORTHO05D009903 3.1e-25 119.8 135 41.5
FAN25G0937 Fragaria x ananassa HOM05D007829 ORTHO05D009903 5.3e-25 119.0 155 38.7
Glyma.09G010400 Glycine max HOM05D007829 ORTHO05D009903 5.3e-25 119.0 129 43.4
Sp7g20500 Schrenkiella parvula HOM05D007829 ORTHO05D009903 6.9e-25 118.6 128 43.0
Carub.0007s1893 Capsella rubella HOM05D007829 ORTHO05D009903 6.5e-23 112.1 112 45.5
ATR0712G049 Amborella trichopoda HOM05D007829 ORTHO05D009903 3.2e-22 109.8 127 42.5
VMungo0540G1426 Vigna mungo HOM05D007829 ORTHO05D009903 2.7e-21 106.7 129 39.5
MBI19_g06149_MAGBIO Magnolia biondii HOM05D007829 ORTHO05D009903 2.3e-20 103.6 109 46.8
unitig_5.g30996 Utricularia gibba HOM05D000093 ORTHO05D001309 4.4e-19 99.4 136 40.4
Lalb_Chr15g0088001 Lupinus albus HOM05D007829 ORTHO05D009903 2.2e-18 97.1 129 41.1
SalBow8G1028 Salvia bowleyana HOM05D007829 ORTHO05D009903 4.8e-18 95.9 130 43.1
TPR.G18790 Trifolium pratense HOM05D007829 ORTHO05D009903 4.8e-18 95.9 81 53.1
AL7G31240 Arabidopsis lyrata HOM05D007829 ORTHO05D009903 8.2e-18 95.1 92 48.9
Sed0017863 Sechium edule HOM05D007829 ORTHO05D009903 1.2e-16 91.3 127 36.2
Cfa000096 Carpinus fangiana HOM05D007829 ORTHO05D009903 2.0e-16 90.5 77 59.7
Thhalv10027004m.g Eutrema salsugineum HOM05D007829 ORTHO05D009903 1.4e-14 84.3 117 37.6
Phvul.006G143000 Phaseolus vulgaris HOM05D007829 ORTHO05D009903 4.2e-14 82.8 131 32.8
ClCG01G021470 Citrullus lanatus HOM05D007829 ORTHO05D009903 1.6e-13 80.9 127 33.9
Aa31LG6G4470 Aethionema arabicum HOM05D007829 ORTHO05D009903 4.7e-13 79.3 110 38.2
unitig_748.g7131 Utricularia gibba HOM05D007829 ORTHO05D009903 5.2e-12 75.9 82 47.6
CsaV3_6G048490 Cucumis sativus L. HOM05D007829 ORTHO05D009903 5.7e-11 72.4 127 29.1
Duzib205G0538 Durio zibethinus HOM05D002745 ORTHO05D002945 4.1e-09 66.2 117 28.2
CANSAT56G3529 Cannabis sativa HOM05D002745 ORTHO05D002945 1.2e-08 64.7 129 27.9
Thecc.03G284700 Theobroma cacao HOM05D002745 ORTHO05D002945 3.5e-08 63.2 117 29.1
CSS0032449 Camellia sinensis var. sinensis HOM05D002745 ORTHO05D002945 4.5e-08 62.8 117 26.5
Dinv38911 Davidia involucrata HOM05D002745 ORTHO05D002945 4.5e-08 62.8 137 27.7
AT5G41470 Arabidopsis thaliana HOM05D002745 ORTHO05D002945 5.9e-08 62.4 116 29.3
SalBow7G1915 Salvia bowleyana HOM05D000972 ORTHO05D007902 2.2e-07 60.5 130 28.5
CARHR291200 Cardamine hirsuta HOM05D002745 ORTHO05D002945 2.9e-07 60.1 120 28.3
Nitab4.5_0015422g0020 Nicotiana tabacum HOM05D007829 ORTHO05D009903 3.8e-07 59.7 32 87.5
Eucgr.E00649 Eucalyptus grandis HOM05D002745 ORTHO05D002945 5.0e-07 59.3 116 29.3
Thhalv10019116m.g Eutrema salsugineum HOM05D002745 ORTHO05D002945 5.0e-07 59.3 120 28.3
SEGI_29799 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 5.0e-07 59.3 137 24.8
Gorai.013G178400 Gossypium raimondii HOM05D002745 ORTHO05D002945 6.5e-07 58.9 120 25.8
AL2G31140 Arabidopsis lyrata HOM05D002745 ORTHO05D002945 8.5e-07 58.5 120 28.3
FAN08G3121 Fragaria x ananassa HOM05D002745 ORTHO05D002945 8.5e-07 58.5 140 25.7
AT1G71480 Arabidopsis thaliana HOM05D002745 ORTHO05D002945 1.1e-06 58.2 120 28.3
FvH4_5g03000 Fragaria vesca HOM05D002745 ORTHO05D002945 1.1e-06 58.2 139 25.9
Carub.0002s1834 Capsella rubella HOM05D002745 ORTHO05D002945 1.5e-06 57.8 120 28.3
CsaV3_5G002540 Cucumis sativus L. HOM05D002745 ORTHO05D002945 1.5e-06 57.8 143 25.9
Gohir.A13G153132 Gossypium hirsutum HOM05D002745 ORTHO05D002945 2.5e-06 57.0 120 25.0
Pp3c17_5580 Physcomitrium patens HOM05D002745 ORTHO05D002945 2.5e-06 57.0 103 28.2
Gohir.D13G157700 Gossypium hirsutum HOM05D002745 ORTHO05D002945 4.2e-06 56.2 108 26.9
Aa31LG4G9110 Aethionema arabicum HOM05D002745 ORTHO05D002945 5.5e-06 55.8 120 27.5
Sed0004172 Sechium edule HOM05D002745 ORTHO05D002945 5.5e-06 55.8 117 29.1
Prupe.5G104900 Prunus persica HOM05D002745 ORTHO05D002945 9.4e-06 55.1 101 31.7


User provided reference genes

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