Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 5.1e-106 387.9 214 100.0
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 7.4e-105 384.0 214 98.6
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 5.3e-103 377.9 214 97.2
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.0e-77 293.9 215 81.4
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.9e-76 289.7 215 79.5
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 1.2e-75 287.0 212 77.8
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.6e-62 243.4 150 91.3
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 6.3e-56 221.5 216 63.0
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 4.1e-55 218.8 202 65.3
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.6e-54 216.9 214 60.7
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 1.5e-52 210.3 208 60.1
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 9.4e-52 207.6 227 56.8
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.2e-51 207.2 213 61.0
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 6.8e-50 201.4 214 58.9
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 2.0e-49 199.9 212 56.6
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 9.8e-49 197.6 208 57.2
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 1.8e-47 193.4 212 55.7
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 7.0e-47 191.4 219 54.8
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 9.2e-47 191.0 270 48.1
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.6e-46 190.3 195 57.9
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 1.6e-46 190.3 198 55.6
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 1.0e-45 187.6 194 56.7
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 1.3e-45 187.2 212 54.7
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 1.7e-45 186.8 218 52.8
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 2.3e-45 186.4 214 54.7
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 5.6e-44 181.8 213 53.5
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 7.3e-44 181.4 223 52.0
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 8.0e-43 177.9 214 49.1
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 1.0e-42 177.6 212 52.4
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 1.4e-42 177.2 221 53.4
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 2.3e-42 176.4 212 53.3
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 2.3e-42 176.4 217 53.5
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 2.3e-42 176.4 214 57.5
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 3.0e-42 176.0 188 51.6
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 8.9e-42 174.5 214 49.1
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 1.2e-41 174.1 214 48.1
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 2.0e-41 173.3 171 60.2
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 2.6e-41 172.9 213 51.6
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 3.4e-41 172.6 220 52.7
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 3.4e-41 172.6 220 52.7
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 4.4e-41 172.2 172 56.4
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 5.7e-41 171.8 175 53.7
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 7.5e-41 171.4 174 52.9
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 9.8e-41 171.0 220 51.4
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.3e-40 170.6 224 50.9
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.2e-40 169.9 202 51.0
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 2.9e-40 169.5 213 48.4
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 2.9e-40 169.5 170 58.2
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.9e-40 169.5 224 50.4
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 6.4e-40 168.3 213 50.7
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.1e-39 167.5 149 64.4
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 3.2e-39 166.0 181 54.1
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 3.2e-39 166.0 156 58.3
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 9.2e-39 164.5 218 45.9
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 9.2e-39 164.5 170 54.7
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 7.8e-38 161.4 213 48.4
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 5.0e-37 158.7 211 49.8
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 1.1e-36 157.5 172 58.1
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 7.3e-36 154.8 179 55.3
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 6.2e-35 151.8 213 44.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 8.0e-35 151.4 175 48.6
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 8.0e-35 151.4 169 52.1
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 6.8e-34 148.3 149 60.4
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 8.9e-34 147.9 190 50.5
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 8.9e-34 147.9 170 56.5
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.2e-33 147.5 151 56.3
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 1.5e-33 147.1 167 54.5
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.0e-33 146.7 213 45.1
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 3.4e-33 146.0 214 48.6
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 7.5e-33 144.8 165 52.7
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 1.3e-32 144.1 180 46.1
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.7e-32 143.7 179 53.1
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 5.4e-31 138.7 169 52.7
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 5.4e-31 138.7 174 50.0
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 7.0e-31 138.3 171 55.6
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 9.2e-31 137.9 168 48.8
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 9.2e-31 137.9 168 54.2
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 9.2e-31 137.9 168 54.2
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 2.7e-30 136.3 173 45.1
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 3.0e-29 132.9 166 52.4
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 3.9e-29 132.5 170 53.5
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 5.0e-29 132.1 167 53.9
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 5.0e-29 132.1 167 53.9
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 8.6e-29 131.3 126 62.7
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 1.1e-28 131.0 164 53.0
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 5.6e-28 128.6 160 54.4
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 9.5e-28 127.9 168 47.0
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 9.5e-28 127.9 168 47.0
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 2.8e-27 126.3 193 49.2
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 4.7e-27 125.6 154 47.4
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.8e-26 123.6 161 47.2
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 3.1e-26 122.9 200 41.0
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 3.7e-24 115.9 149 47.7
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 1.1e-23 114.4 145 59.3
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 6.0e-22 108.6 145 55.2
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.3e-20 102.8 126 47.6
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 3.1e-18 96.3 165 41.2
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 8.9e-18 94.7 128 48.4
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 2.2e-16 90.1 102 48.0
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 2.2e-16 90.1 102 48.0
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.0e-13 81.3 212 33.0
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 2.3e-13 80.1 152 37.5
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 3.0e-13 79.7 218 31.7
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.5e-12 77.4 186 31.7
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 1.6e-11 73.9 177 43.5
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 8.9e-10 68.2 176 36.4
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 4.6e-06 55.8 164 34.8
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 4.6e-06 55.8 164 34.8


User provided reference genes

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