Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 5.6e-258 893.6 421 100.0
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 1.4e-256 889.0 421 99.0
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.2e-244 849.4 419 93.8
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 6.0e-244 847.0 419 93.8
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 5.9e-239 830.5 422 92.2
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.1e-236 822.0 504 80.6
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 3.2e-229 798.1 459 82.4
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 9.4e-221 770.0 419 84.2
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 1.6e-215 752.7 418 82.8
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 4.5e-215 751.1 419 81.1
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 1.3e-214 749.6 419 82.1
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 5.0e-214 747.7 420 81.4
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 2.5e-213 745.3 419 81.1
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 9.4e-213 743.4 421 80.5
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 1.0e-211 740.0 418 79.9
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 4.0e-211 738.0 413 81.6
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 4.0e-211 738.0 418 79.7
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 6.7e-211 737.3 421 80.0
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 8.8e-211 736.9 418 80.9
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 8.8e-211 736.9 421 80.8
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 1.5e-210 736.1 418 80.4
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 2.0e-210 735.7 418 80.6
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 2.6e-210 735.3 419 79.7
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 2.6e-210 735.3 417 80.8
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 2.6e-210 735.3 418 80.1
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 4.4e-210 734.6 418 81.1
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 7.5e-210 733.8 417 79.6
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 7.5e-210 733.8 421 80.3
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 9.7e-210 733.4 419 79.2
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 9.7e-210 733.4 419 79.0
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 2.8e-209 731.9 418 79.4
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 1.8e-208 729.2 419 79.5
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 1.8e-208 729.2 418 79.7
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 2.4e-208 728.8 417 80.3
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 3.1e-208 728.4 400 83.0
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 7.0e-208 727.2 419 79.2
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 2.0e-207 725.7 419 78.8
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 2.0e-207 725.7 418 79.4
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 2.0e-207 725.7 421 78.9
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 5.9e-207 724.2 418 79.7
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 7.7e-207 723.8 419 79.0
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 1.0e-206 723.4 420 79.3
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 5.0e-206 721.1 417 79.4
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 6.5e-206 720.7 418 77.8
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 6.5e-206 720.7 417 78.2
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 8.5e-206 720.3 418 77.0
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 1.1e-205 719.9 419 78.3
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 2.5e-205 718.8 448 75.0
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 2.5e-205 718.8 448 75.0
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 4.2e-205 718.0 417 78.2
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 7.2e-205 717.2 418 76.8
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 1.2e-204 716.5 417 77.5
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 1.6e-204 716.1 418 77.8
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 2.7e-204 715.3 420 78.3
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 1.0e-203 713.4 417 77.0
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 3.0e-203 711.8 417 77.0
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 4.0e-203 711.4 452 73.0
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.0e-203 711.4 417 78.2
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 4.0e-203 711.4 417 77.9
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 5.2e-203 711.1 417 78.9
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 6.8e-203 710.7 417 76.7
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 8.8e-203 710.3 418 76.6
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 1.5e-202 709.5 422 78.0
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 2.0e-202 709.1 417 77.7
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 2.6e-202 708.8 417 76.3
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 9.8e-202 706.8 420 77.1
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 9.8e-202 706.8 417 77.7
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 3.7e-201 704.9 421 75.5
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 4.8e-201 704.5 424 77.4
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 6.3e-201 704.1 422 77.3
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 1.4e-200 703.0 417 76.7
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.4e-200 703.0 417 77.5
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 2.4e-200 702.2 417 77.2
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 4.1e-200 701.4 416 75.5
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 7.0e-200 700.7 395 80.0
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 7.0e-200 700.7 417 75.5
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 7.0e-200 700.7 417 76.0
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 1.2e-199 699.9 419 77.8
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 1.6e-199 699.5 417 75.5
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 4.5e-199 698.0 419 75.9
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 7.7e-199 697.2 416 75.5
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 1.0e-198 696.8 416 76.4
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 1.0e-198 696.8 419 77.3
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 1.3e-198 696.4 420 75.5
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 2.9e-198 695.3 417 75.3
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 5.0e-198 694.5 429 75.8
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 1.6e-196 689.5 417 74.3
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 2.1e-196 689.1 420 76.9
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 6.1e-196 687.6 397 78.8
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 1.0e-195 686.8 417 74.8
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 1.4e-195 686.4 456 71.1
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 4.0e-195 684.9 397 80.1
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 6.8e-195 684.1 412 77.2
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 2.0e-194 682.6 404 77.0
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 3.4e-194 681.8 403 76.7
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 5.7e-194 681.0 404 76.7
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 1.7e-193 679.5 403 76.4
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 3.1e-192 675.2 425 72.9
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 7.0e-192 674.1 426 73.2
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 1.6e-191 672.9 384 80.5
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 2.9e-190 668.7 422 73.9
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 5.6e-189 664.5 431 72.9
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 8.0e-188 660.6 432 72.9
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 8.9e-187 657.1 420 69.8
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 8.3e-185 650.6 419 69.5
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 1.1e-184 650.2 456 68.9
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 2.4e-184 649.0 418 73.4
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 2.0e-178 629.4 401 73.1
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 3.4e-178 628.6 415 72.8
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 3.6e-164 582.0 421 67.5
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 1.4e-163 580.1 418 64.6
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 2.9e-161 572.4 371 72.8
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 3.8e-161 572.0 417 64.7
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 3.2e-160 568.9 416 61.1
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 1.9e-157 559.7 421 64.8
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 1.9e-157 559.7 300 82.7
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 1.4e-155 553.5 358 69.6
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 2.6e-154 549.3 419 61.6
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 1.9e-152 543.1 440 62.0
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 1.9e-141 506.5 424 56.1
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 1.3e-140 503.8 359 64.6
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 3.7e-132 475.7 275 78.9
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 9.3e-128 461.1 465 53.1
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 4.6e-127 458.8 466 52.8
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 1.0e-121 441.0 468 47.6
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 2.5e-120 436.4 470 48.5
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 3.1e-107 392.9 422 48.6
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 3.3e-48 196.8 115 75.7
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 3.6e-31 140.2 104 62.5
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.1e-30 137.1 115 57.4
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 2.2e-28 131.0 93 66.7
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 2.9e-28 130.6 89 64.0
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 2.9e-28 130.6 89 64.0
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 5.5e-19 99.8 55 78.2
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 1.0e-17 95.5 136 41.2
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 8.7e-17 92.4 69 59.4
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 2.5e-16 90.9 67 61.2
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 4.3e-16 90.1 67 59.7
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 2.4e-14 84.3 65 58.5
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-07 62.0 65 47.7
CAN.G327.2 Capsicum annuum HOM05D001287 ORTHO05D010951 1.1e-06 58.9 25 96.0
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 1.8e-06 58.2 121 32.2
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 3.1e-06 57.4 36 63.9


User provided reference genes

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