Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 2.7e-70 270.4 134 100.0
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 1.0e-69 268.5 134 99.3
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 1.0e-66 258.5 134 95.5
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 9.5e-60 235.3 134 86.6
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 8.1e-59 232.3 134 85.1
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 7.5e-57 225.7 133 83.5
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.1e-55 219.9 129 82.9
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 5.1e-53 213.0 128 82.8
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 1.5e-52 211.5 136 78.7
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.8e-50 204.5 134 78.4
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 2.0e-33 147.9 133 55.6
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 4.4e-33 146.7 133 54.1
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 2.2e-32 144.4 133 51.1
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 8.4e-32 142.5 133 49.6
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 8.4e-32 142.5 133 49.6
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 5.4e-31 139.8 133 49.6
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.6e-30 138.3 133 48.9
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 2.1e-30 137.9 133 51.1
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 2.3e-29 134.4 130 53.8
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 1.9e-28 131.3 126 48.4
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 4.3e-28 130.2 133 46.6
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 4.3e-28 130.2 133 47.4
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 1.6e-27 128.3 133 45.9
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 1.6e-27 128.3 133 46.6
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 2.1e-27 127.9 133 45.9
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 2.1e-27 127.9 120 51.7
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 2.1e-27 127.9 127 48.8
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 2.1e-27 127.9 133 46.6
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 2.8e-27 127.5 134 46.3
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 4.8e-27 126.7 133 45.9
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 1.1e-26 125.6 133 45.1
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 1.8e-26 124.8 133 44.4
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 3.1e-26 124.0 135 45.9
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 3.1e-26 124.0 133 47.4
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 4.0e-26 123.6 133 44.4
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 4.0e-26 123.6 133 44.4
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 5.3e-26 123.2 133 43.6
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 6.9e-26 122.9 126 47.6
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 9.0e-26 122.5 132 45.5
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 1.2e-25 122.1 133 44.4
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.2e-25 122.1 135 44.4
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 2.0e-25 121.3 139 43.9
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 2.0e-25 121.3 133 43.6
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 4.5e-25 120.2 117 48.7
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 1.3e-24 118.6 127 45.7
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 1.7e-24 118.2 133 42.9
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 3.8e-24 117.1 134 47.0
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 6.4e-24 116.3 152 40.8
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 8.4e-24 115.9 133 42.9
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 1.1e-23 115.5 117 53.0
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 1.1e-23 115.5 133 43.6
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 1.1e-23 115.5 117 49.6
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 2.4e-23 114.4 129 42.6
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 2.4e-23 114.4 132 42.4
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 3.2e-23 114.0 127 44.1
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 5.5e-23 113.2 117 47.0
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 5.5e-23 113.2 133 42.9
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 5.5e-23 113.2 130 43.1
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 7.1e-23 112.8 135 43.0
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 1.2e-22 112.1 134 41.8
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 1.6e-22 111.7 136 45.6
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 3.5e-22 110.5 135 41.5
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 3.5e-22 110.5 90 54.4
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 6.0e-22 109.8 135 40.0
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 1.0e-21 109.0 92 52.2
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 1.3e-21 108.6 140 41.4
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 2.3e-21 107.8 138 40.6
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 3.0e-21 107.5 136 39.7
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 1.1e-20 105.5 137 40.9
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 1.3e-19 102.1 84 52.4
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 1.3e-19 102.1 85 56.5
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 2.8e-19 100.9 135 40.0
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 1.4e-18 98.6 136 38.2
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 1.4e-18 98.6 90 47.8
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 2.4e-18 97.8 133 40.6
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 6.9e-18 96.3 92 46.7
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 9.0e-18 95.9 87 52.9
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 5.8e-17 93.2 92 50.0
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 1.7e-16 91.7 126 38.9
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 1.7e-16 91.7 87 50.6
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 3.8e-16 90.5 120 39.2
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 8.4e-16 89.4 133 38.3
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.1e-15 89.0 49 81.6
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 1.9e-15 88.2 122 39.3
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 3.2e-15 87.4 111 42.3
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 6.0e-14 83.2 118 35.6
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.6e-11 75.1 133 34.6
Nitab4.5_0009075g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 9.0e-10 69.3 38 86.8
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 8.4e-08 62.8 91 33.0
HanXRQChr12g0374971 Helianthus annuus HOM05D007083 ORTHO05D008801 1.9e-07 61.6 123 27.6
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 2.5e-07 61.2 107 29.9
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 1.6e-06 58.5 126 26.2
CAN.G578.7 Capsicum annuum HOM05D002890 ORTHO05D009847 2.1e-06 58.2 143 30.1
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 2.1e-06 58.2 48 56.2
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 3.5e-06 57.4 118 30.5
CANSAT21G0576 Cannabis sativa HOM05D007496 ORTHO05D009479 3.5e-06 57.4 130 25.4
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 3.5e-06 57.4 96 34.4
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 7.9e-06 56.2 138 29.7
Solyc01g109060.4 Solanum lycopersicum HOM05D007083 ORTHO05D008801 7.9e-06 56.2 107 28.0
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 7.9e-06 56.2 89 31.5
PGSC0003DMG400025930 Solanum tuberosum HOM05D007083 ORTHO05D008801 7.9e-06 56.2 89 31.5


User provided reference genes

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