Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 8.4e-225 783.5 429 100.0
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 5.4e-224 780.8 429 99.5
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 3.5e-215 751.5 429 96.5
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 2.0e-202 709.1 430 93.0
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 8.5e-185 650.6 425 87.3
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.4e-176 623.2 421 85.3
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.9e-161 572.4 421 80.8
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 1.7e-140 503.4 430 70.2
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 1.2e-138 497.3 426 70.0
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 4.5e-138 495.4 427 69.8
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 2.1e-135 486.5 429 68.1
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 4.7e-135 485.3 415 69.4
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 6.8e-134 481.5 427 67.9
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.5e-133 480.3 431 67.1
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.6e-130 470.3 413 68.8
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 1.3e-129 467.2 416 68.0
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 3.9e-129 465.7 432 66.2
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 8.6e-129 464.5 439 64.9
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 3.3e-128 462.6 416 67.8
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 1.6e-127 460.3 418 68.2
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 2.3e-126 456.4 431 65.7
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 5.2e-126 455.3 422 65.4
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 6.8e-126 454.9 443 63.2
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 1.2e-125 454.1 438 65.1
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 2.0e-125 453.4 433 65.6
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 3.7e-124 449.1 430 65.1
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 8.3e-124 448.0 389 69.7
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 1.1e-123 447.6 444 64.6
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 1.4e-123 447.2 450 59.1
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 1.4e-123 447.2 419 66.1
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 7.0e-123 444.9 416 64.9
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 2.1e-122 443.4 381 69.6
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.7e-122 443.0 389 68.9
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 3.5e-122 442.6 430 63.3
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 6.0e-122 441.8 411 68.1
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 7.8e-122 441.4 428 63.3
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 1.1e-120 437.6 416 65.1
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 2.5e-120 436.4 425 64.0
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 4.3e-120 435.6 434 62.4
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 1.1e-118 431.0 439 62.2
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 1.2e-117 427.6 434 62.2
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 3.4e-117 426.0 433 64.0
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 3.4e-117 426.0 414 64.0
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 1.7e-116 423.7 326 76.4
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.4e-115 420.6 424 63.2
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 2.4e-115 419.9 453 56.5
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 9.2e-115 417.9 427 62.1
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 9.2e-115 417.9 419 63.2
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 1.6e-114 417.2 397 65.0
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.6e-114 417.2 419 63.2
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.1e-114 416.8 424 62.5
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 7.8e-114 414.8 439 62.4
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 5.1e-113 412.1 380 66.1
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 1.5e-112 410.6 366 68.9
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 7.3e-112 408.3 388 65.7
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 1.2e-111 407.5 428 61.0
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 1.6e-111 407.1 372 67.5
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 2.8e-111 406.4 374 66.3
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 2.8e-111 406.4 378 65.1
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 4.7e-111 405.6 427 60.4
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 8.9e-110 401.4 430 59.8
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 1.2e-109 401.0 422 60.7
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 1.2e-109 401.0 355 69.9
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.2e-109 401.0 406 62.1
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 2.0e-109 400.2 362 69.1
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 4.4e-109 399.1 312 75.3
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 2.2e-108 396.7 413 60.5
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 3.8e-108 396.0 373 66.8
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 4.9e-108 395.6 363 68.9
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 6.4e-108 395.2 357 69.5
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 1.4e-107 394.0 374 66.8
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 4.2e-107 392.5 371 65.8
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 4.2e-107 392.5 365 67.9
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 1.2e-106 391.0 348 69.5
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 1.2e-106 391.0 348 69.5
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 1.6e-106 390.6 358 69.3
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 1.6e-106 390.6 358 69.3
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 1.6e-106 390.6 348 69.8
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 3.5e-106 389.4 429 57.6
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 3.9e-105 386.0 471 54.8
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 5.1e-105 385.6 424 58.7
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 4.3e-104 382.5 417 60.7
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 7.3e-104 381.7 339 69.6
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 2.8e-103 379.8 339 70.2
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 3.6e-103 379.4 361 62.6
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 4.8e-103 379.0 391 61.6
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 4.0e-102 375.9 409 59.2
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 6.9e-102 375.2 415 58.1
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 9.0e-102 374.8 384 59.6
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 5.8e-101 372.1 410 59.5
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 7.6e-101 371.7 410 59.3
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 1.6e-98 364.0 377 64.7
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 2.7e-98 363.2 398 58.5
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 5.1e-97 359.0 254 73.2
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 1.6e-95 354.0 292 65.1
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.1e-94 351.3 243 75.3
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 4.9e-92 342.4 308 67.5
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 4.9e-92 342.4 390 57.7
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 2.4e-91 340.1 320 66.9
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 1.6e-82 310.8 410 54.1
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 6.7e-81 305.4 298 66.8
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 6.7e-81 305.4 372 55.9
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 9.6e-80 301.6 303 65.7
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 3.7e-71 273.1 199 74.9
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 1.0e-68 265.0 421 42.8
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 1.5e-61 241.1 224 62.9
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 2.6e-56 223.8 257 60.3
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 2.0e-53 214.2 368 42.4
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.9e-51 207.6 233 50.2
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 7.2e-51 205.7 308 46.1
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.6e-50 204.5 315 48.9
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 3.6e-50 203.4 131 80.9
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 3.0e-49 200.3 270 55.6
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.1e-48 198.4 221 51.6
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 7.5e-40 169.1 249 50.2
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 7.0e-38 162.5 244 40.6
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 4.5e-37 159.8 109 77.1
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 1.4e-33 148.3 208 42.3
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 2.6e-32 144.1 208 54.8
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 3.1e-30 137.1 77 92.2
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 4.3e-19 100.1 60 83.3
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.2e-16 92.0 159 45.9
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 6.0e-13 79.7 137 39.4
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 4.3e-11 73.6 101 49.5
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 5.6e-11 73.2 96 42.7


User provided reference genes

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