Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 3.9e-271 937.6 480 100.0
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 2.6e-267 924.9 480 98.5
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 2.2e-173 612.8 514 65.6
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.4e-156 556.2 441 65.8
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 3.8e-141 505.8 398 65.1
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 4.2e-124 449.1 467 53.3
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.1e-123 446.8 381 62.2
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.2e-118 431.0 371 60.9
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 2.1e-115 420.2 413 55.7
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 7.9e-115 418.3 384 58.9
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 1.9e-113 413.7 327 65.1
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 7.4e-113 411.8 373 56.6
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 4.8e-112 409.1 351 58.4
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 1.8e-111 407.1 378 55.6
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 7.7e-110 401.7 423 53.7
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.3e-109 401.0 380 54.5
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.7e-109 400.6 412 52.4
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.9e-109 399.8 391 53.7
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 3.8e-109 399.4 380 58.2
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 5.0e-109 399.1 441 50.3
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 5.0e-109 399.1 446 49.8
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 6.5e-109 398.7 391 54.0
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 8.5e-109 398.3 417 51.3
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 8.5e-109 398.3 442 50.2
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.4e-108 397.5 481 48.6
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.7e-107 393.3 448 48.4
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 3.6e-107 392.9 410 51.7
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 6.1e-107 392.1 396 53.3
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 7.9e-107 391.7 374 54.8
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.8e-106 390.6 425 52.2
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.8e-106 390.6 386 53.4
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 6.7e-106 388.7 423 49.9
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 8.8e-106 388.3 380 54.2
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 4.3e-105 386.0 376 53.7
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 7.4e-105 385.2 439 49.9
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 1.3e-104 384.4 483 47.0
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 1.1e-103 381.3 467 46.5
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.4e-103 380.9 425 48.9
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 1.8e-103 380.6 407 52.3
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 3.1e-103 379.8 378 52.9
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 9.1e-103 378.3 467 46.3
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.6e-102 376.7 408 49.8
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.4e-102 376.3 437 48.1
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 4.5e-102 375.9 375 54.4
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 4.5e-102 375.9 408 49.8
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 1.2e-99 367.9 397 51.1
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.2e-99 367.9 361 53.2
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 4.4e-97 359.4 361 52.1
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 5.7e-97 359.0 389 50.4
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 9.7e-97 358.2 389 50.1
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 1.3e-96 357.8 467 46.9
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 2.2e-96 357.1 378 51.3
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 8.2e-96 355.1 432 47.9
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.4e-95 354.4 461 46.4
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.4e-95 353.6 412 49.8
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 2.4e-95 353.6 340 55.3
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 5.3e-95 352.4 477 44.0
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 2.0e-94 350.5 395 50.4
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 3.5e-94 349.7 518 41.3
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.3e-93 347.8 395 49.6
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.7e-93 347.4 333 54.1
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.9e-93 346.7 450 46.0
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 2.9e-93 346.7 483 44.3
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 3.2e-92 343.2 466 43.8
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 5.5e-92 342.4 256 63.3
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.2e-91 341.3 402 47.8
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 1.6e-91 340.9 335 53.7
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 8.8e-90 335.1 411 47.4
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 9.7e-89 331.6 379 48.0
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 9.7e-89 331.6 377 50.7
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 1.7e-88 330.9 311 55.3
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 2.0e-86 323.9 224 71.4
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 3.5e-86 323.2 375 49.6
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 1.0e-85 321.6 372 49.5
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 6.5e-85 318.9 323 52.6
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 1.5e-84 317.8 256 60.9
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 3.2e-84 316.6 443 42.4
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 3.6e-83 313.2 346 49.7
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.6e-83 313.2 402 47.5
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 6.1e-83 312.4 288 55.9
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.4e-82 311.2 323 52.0
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 4.0e-82 309.7 459 42.7
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.2e-81 308.1 465 42.2
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 1.3e-77 294.7 301 52.2
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 2.9e-77 293.5 209 66.5
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 2.7e-75 287.0 293 52.2
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 2.7e-75 287.0 338 50.6
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.0e-74 285.0 251 58.2
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 3.1e-71 273.5 209 63.6
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.2e-70 271.6 379 42.2
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.2e-70 271.6 293 52.6
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 2.9e-69 266.9 396 41.9
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.1e-63 248.4 318 47.5
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.2e-59 235.0 244 49.6
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 6.2e-59 232.6 278 45.3
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 4.0e-58 229.9 181 67.4
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 4.9e-56 223.0 385 37.7
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 1.0e-53 215.3 267 40.1
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 4.4e-49 199.9 274 45.6
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 7.5e-49 199.1 301 39.9
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 1.6e-46 191.4 180 51.7
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 7.8e-46 189.1 121 73.6
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.0e-45 188.7 117 74.4
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 7.8e-38 162.5 218 42.7
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 4.0e-34 150.2 172 47.1
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 4.0e-34 150.2 172 47.1
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 8.7e-29 132.5 412 28.9
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.3e-21 108.6 230 34.8


User provided reference genes

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