Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.6e-107 392.9 213 100.0
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.1e-105 386.7 213 98.1
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 4.4e-102 374.8 213 94.8
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 5.6e-89 331.3 213 82.6
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 6.2e-88 327.8 211 83.4
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 4.3e-73 278.5 204 72.5
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.0e-66 257.3 211 64.9
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 2.0e-65 253.1 200 69.5
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 7.4e-65 251.1 211 64.5
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 1.8e-63 246.5 213 65.7
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 2.9e-61 239.2 211 60.7
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 3.8e-61 238.8 211 60.7
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 8.5e-61 237.7 211 62.6
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 8.5e-61 237.7 211 62.6
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 8.5e-61 237.7 210 61.9
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 7.9e-59 231.1 209 61.7
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.4e-58 230.3 211 58.8
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.4e-58 230.3 211 58.8
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 3.9e-58 228.8 211 59.7
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 8.8e-58 227.6 211 60.2
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.5e-57 226.9 215 57.7
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 3.3e-57 225.7 211 59.7
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 4.4e-57 225.3 210 60.0
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 8.2e-56 221.1 210 59.0
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 4.1e-55 218.8 211 56.9
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 4.1e-55 218.8 210 59.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 1.6e-54 216.9 212 58.5
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 5.9e-54 214.9 211 56.4
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 5.9e-54 214.9 213 56.8
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 2.2e-53 213.0 209 57.9
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 2.9e-53 212.6 211 55.5
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 8.5e-53 211.1 202 59.4
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 4.2e-52 208.8 212 55.7
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 9.4e-52 207.6 211 56.4
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 1.6e-51 206.8 213 53.5
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 8.0e-51 204.5 211 55.0
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.4e-50 203.8 210 56.7
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 3.0e-50 202.6 214 56.5
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 2.0e-49 199.9 209 52.2
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 2.6e-49 199.5 211 53.6
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 3.3e-49 199.1 212 53.3
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 5.7e-49 198.4 213 55.9
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 7.5e-49 198.0 211 54.0
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 2.2e-48 196.4 212 55.2
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 2.2e-48 196.4 212 53.3
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 2.2e-48 196.4 214 52.3
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 3.7e-48 195.7 213 54.0
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 4.8e-48 195.3 212 54.7
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 4.8e-48 195.3 212 54.7
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 6.3e-48 194.9 212 54.7
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.1e-47 194.1 212 53.8
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 1.1e-47 194.1 209 51.2
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 1.8e-47 193.4 211 52.1
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 2.4e-47 193.0 212 52.4
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 3.1e-47 192.6 212 53.8
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 7.0e-47 191.4 217 52.5
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 9.1e-47 191.0 211 51.2
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 2.0e-46 189.9 211 53.6
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 2.7e-46 189.5 212 53.3
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 3.5e-46 189.1 211 52.6
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 3.5e-46 189.1 212 52.4
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 3.5e-46 189.1 211 51.7
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 5.9e-46 188.3 208 52.9
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 2.2e-45 186.4 212 53.8
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 2.2e-45 186.4 212 52.4
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 3.8e-45 185.7 212 52.4
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 8.5e-45 184.5 211 51.2
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 8.5e-45 184.5 211 54.5
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 1.9e-44 183.3 212 52.4
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 2.5e-44 183.0 211 51.2
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 3.2e-44 182.6 215 47.9
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 4.2e-44 182.2 215 48.8
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 4.2e-44 182.2 212 49.5
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 7.2e-44 181.4 207 53.1
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 9.4e-44 181.0 208 51.4
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 1.6e-43 180.3 218 50.9
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.1e-43 179.9 212 50.0
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 4.7e-43 178.7 209 50.2
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 6.1e-43 178.3 213 51.2
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 8.0e-43 177.9 211 50.2
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 1.4e-42 177.2 202 50.5
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 1.8e-42 176.8 215 49.8
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 5.2e-42 175.3 213 49.8
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 6.8e-42 174.9 215 52.1
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 1.2e-41 174.1 202 51.0
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.2e-41 174.1 212 51.4
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 1.2e-41 174.1 219 48.9
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 1.2e-41 174.1 210 47.6
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 1.2e-41 174.1 212 47.6
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.5e-41 173.7 213 46.9
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 2.0e-41 173.3 198 52.0
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 2.6e-41 172.9 200 51.0
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 3.4e-41 172.6 209 52.6
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 3.4e-41 172.6 211 48.8
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 9.8e-41 171.0 215 47.4
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 1.3e-40 170.6 208 49.5
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 2.8e-40 169.5 206 49.0
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.8e-40 169.5 211 47.4
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 3.7e-40 169.1 215 47.0
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 3.7e-40 169.1 197 52.3
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 3.7e-40 169.1 197 52.3
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 3.7e-40 169.1 210 50.5
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 8.3e-40 167.9 210 47.6
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 1.8e-39 166.8 197 51.3
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 1.8e-39 166.8 214 48.6
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 4.1e-39 165.6 197 51.3
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 4.1e-39 165.6 199 49.2
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 4.1e-39 165.6 209 47.4
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 5.4e-39 165.2 199 48.7
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.2e-38 164.1 217 46.5
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 3.5e-38 162.5 175 54.3
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.3e-37 160.6 212 45.8
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 2.2e-37 159.8 213 45.5
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 2.9e-37 159.5 213 45.1
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 5.0e-37 158.7 210 45.7
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 6.5e-37 158.3 194 49.5
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 6.5e-37 158.3 213 45.5
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 6.5e-37 158.3 200 48.0
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.1e-36 157.5 209 45.5
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 3.2e-36 156.0 216 45.4
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 3.2e-36 156.0 215 46.0
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 3.2e-36 156.0 197 48.7
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 7.2e-36 154.8 209 45.5
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.2e-35 154.1 213 44.6
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 8.0e-35 151.4 215 43.7
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 2.0e-33 146.7 139 59.7
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 2.6e-33 146.4 216 44.0
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 2.6e-33 146.4 207 44.4
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 9.8e-33 144.4 213 43.7
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 1.7e-32 143.7 211 42.2
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 4.9e-32 142.1 186 46.8
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 6.3e-32 141.7 209 43.1
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 8.3e-32 141.4 195 45.6
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 8.3e-32 141.4 215 41.4
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 1.4e-31 140.6 214 42.1
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 1.8e-31 140.2 208 42.3
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 2.0e-30 136.7 211 41.7
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 7.7e-30 134.8 143 53.1
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 1.0e-29 134.4 208 42.8
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.5e-28 130.6 207 40.1
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 5.6e-28 128.6 163 46.6
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 9.5e-28 127.9 194 44.3
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.8e-27 126.3 219 40.2
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 4.9e-24 115.5 179 42.5
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 6.4e-24 115.2 183 39.3
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 9.2e-23 111.3 219 37.9
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 1.6e-22 110.5 205 36.1
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 1.0e-21 107.8 118 51.7
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 6.6e-21 105.1 136 45.6
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 8.6e-21 104.8 117 52.1
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 8.6e-21 104.8 137 46.0
FAN28G2101 Fragaria x ananassa HOM05D004648 ORTHO05D005782 4.9e-08 62.4 60 58.3
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 3.2e-07 59.7 80 43.8


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